Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga6Q91XY2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga6Q91XY2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.03■□□□□ 0.64
Pcdhga6Q91XY2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.03■□□□□ 0.64
Pcdhga6Q91XY2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga6Q91XY2 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.03■□□□□ 0.64
Pcdhga6Q91XY2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga6Q91XY2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga6Q91XY2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhga6Q91XY2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Pcdhga6Q91XY2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga6Q91XY2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga6Q91XY2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.02■□□□□ 0.64
Pcdhga6Q91XY2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga6Q91XY2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.02■□□□□ 0.64
Pcdhga6Q91XY2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.02■□□□□ 0.64
Pcdhga6Q91XY2 Mir6982-201ENSMUST00000184354 68 ntBASIC19.02■□□□□ 0.64
Pcdhga6Q91XY2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.02■□□□□ 0.64
Pcdhga6Q91XY2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.02■□□□□ 0.64
Pcdhga6Q91XY2 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.02■□□□□ 0.64
Pcdhga6Q91XY2 Gm20049-201ENSMUST00000219950 730 ntBASIC19.02■□□□□ 0.64
Pcdhga6Q91XY2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.02■□□□□ 0.64
Pcdhga6Q91XY2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga6Q91XY2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga6Q91XY2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhga6Q91XY2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
Pcdhga6Q91XY2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
Pcdhga6Q91XY2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga6Q91XY2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.01■□□□□ 0.63
Pcdhga6Q91XY2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.01■□□□□ 0.63
Pcdhga6Q91XY2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Pcdhga6Q91XY2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdhga6Q91XY2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga6Q91XY2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga6Q91XY2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga6Q91XY2 Golph3-202ENSMUST00000226517 2359 ntBASIC19.01■□□□□ 0.63
Pcdhga6Q91XY2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.01■□□□□ 0.63
Pcdhga6Q91XY2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhga6Q91XY2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga6Q91XY2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga6Q91XY2 Gm13148-201ENSMUST00000118892 745 ntBASIC19■□□□□ 0.63
Pcdhga6Q91XY2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhga6Q91XY2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhga6Q91XY2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19■□□□□ 0.63
Pcdhga6Q91XY2 Gm43859-201ENSMUST00000200075 1412 ntBASIC19■□□□□ 0.63
Pcdhga6Q91XY2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga6Q91XY2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga6Q91XY2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pcdhga6Q91XY2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga6Q91XY2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga6Q91XY2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga6Q91XY2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.99■□□□□ 0.63
Pcdhga6Q91XY2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Pcdhga6Q91XY2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga6Q91XY2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga6Q91XY2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga6Q91XY2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga6Q91XY2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga6Q91XY2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga6Q91XY2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga6Q91XY2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdhga6Q91XY2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga6Q91XY2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga6Q91XY2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga6Q91XY2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga6Q91XY2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.98■□□□□ 0.63
Pcdhga6Q91XY2 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.98■□□□□ 0.63
Pcdhga6Q91XY2 Gm6365-201ENSMUST00000054711 744 ntBASIC18.98■□□□□ 0.63
Pcdhga6Q91XY2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pcdhga6Q91XY2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga6Q91XY2 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga6Q91XY2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga6Q91XY2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga6Q91XY2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga6Q91XY2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga6Q91XY2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga6Q91XY2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga6Q91XY2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga6Q91XY2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcdhga6Q91XY2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga6Q91XY2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.97■□□□□ 0.63
Pcdhga6Q91XY2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.97■□□□□ 0.63
Pcdhga6Q91XY2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga6Q91XY2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga6Q91XY2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga6Q91XY2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga6Q91XY2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga6Q91XY2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Pcdhga6Q91XY2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Pcdhga6Q91XY2 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga6Q91XY2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga6Q91XY2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhga6Q91XY2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga6Q91XY2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga6Q91XY2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga6Q91XY2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga6Q91XY2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhga6Q91XY2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdhga6Q91XY2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga6Q91XY2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms