Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.09■□□□□ 0.65
Pcdhgb5Q91XX5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Pcdhgb5Q91XX5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhgb5Q91XX5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgb5Q91XX5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.08■□□□□ 0.65
Pcdhgb5Q91XX5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgb5Q91XX5 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhgb5Q91XX5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Pcdhgb5Q91XX5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Pcdhgb5Q91XX5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.08■□□□□ 0.64
Pcdhgb5Q91XX5 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgb5Q91XX5 Gm4968-201ENSMUST00000071458 858 ntBASIC19.08■□□□□ 0.64
Pcdhgb5Q91XX5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgb5Q91XX5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhgb5Q91XX5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Pcdhgb5Q91XX5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.08■□□□□ 0.64
Pcdhgb5Q91XX5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.07■□□□□ 0.64
Pcdhgb5Q91XX5 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdhgb5Q91XX5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdhgb5Q91XX5 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb5Q91XX5 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhgb5Q91XX5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdhgb5Q91XX5 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhgb5Q91XX5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhgb5Q91XX5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Pcdhgb5Q91XX5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb5Q91XX5 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb5Q91XX5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb5Q91XX5 Nespas-201ENSMUST00000143738 1083 ntBASIC19.06■□□□□ 0.64
Pcdhgb5Q91XX5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb5Q91XX5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb5Q91XX5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.06■□□□□ 0.64
Pcdhgb5Q91XX5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb5Q91XX5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcdhgb5Q91XX5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb5Q91XX5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb5Q91XX5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb5Q91XX5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb5Q91XX5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb5Q91XX5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Pcdhgb5Q91XX5 Gm7860-201ENSMUST00000121190 879 ntBASIC19.04■□□□□ 0.64
Pcdhgb5Q91XX5 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdhgb5Q91XX5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb5Q91XX5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb5Q91XX5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb5Q91XX5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb5Q91XX5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.03■□□□□ 0.64
Pcdhgb5Q91XX5 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb5Q91XX5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhgb5Q91XX5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb5Q91XX5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.03■□□□□ 0.64
Pcdhgb5Q91XX5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb5Q91XX5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Pcdhgb5Q91XX5 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb5Q91XX5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb5Q91XX5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb5Q91XX5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhgb5Q91XX5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Pcdhgb5Q91XX5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhgb5Q91XX5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb5Q91XX5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdhgb5Q91XX5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb5Q91XX5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb5Q91XX5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb5Q91XX5 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.02■□□□□ 0.64
Pcdhgb5Q91XX5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.02■□□□□ 0.64
Pcdhgb5Q91XX5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.02■□□□□ 0.64
Pcdhgb5Q91XX5 Gm20760-201ENSMUST00000179197 648 ntBASIC19.02■□□□□ 0.64
Pcdhgb5Q91XX5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.02■□□□□ 0.64
Pcdhgb5Q91XX5 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb5Q91XX5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb5Q91XX5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb5Q91XX5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.02■□□□□ 0.64
Pcdhgb5Q91XX5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhgb5Q91XX5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhgb5Q91XX5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhgb5Q91XX5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb5Q91XX5 Gm6211-202ENSMUST00000167849 925 ntBASIC19.01■□□□□ 0.63
Pcdhgb5Q91XX5 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb5Q91XX5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb5Q91XX5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb5Q91XX5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Pcdhgb5Q91XX5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb5Q91XX5 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb5Q91XX5 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb5Q91XX5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb5Q91XX5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb5Q91XX5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhgb5Q91XX5 Gm13148-201ENSMUST00000118892 745 ntBASIC19■□□□□ 0.63
Pcdhgb5Q91XX5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Pcdhgb5Q91XX5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb5Q91XX5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb5Q91XX5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19■□□□□ 0.63
Pcdhgb5Q91XX5 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb5Q91XX5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb5Q91XX5 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb5Q91XX5 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb5Q91XX5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb5Q91XX5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb5Q91XX5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms