Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb11Q91UZ8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb11Q91UZ8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.68■□□□□ 0.74
Pcdhb11Q91UZ8 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Pcdhb11Q91UZ8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdhb11Q91UZ8 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb11Q91UZ8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb11Q91UZ8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdhb11Q91UZ8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb11Q91UZ8 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb11Q91UZ8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb11Q91UZ8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhb11Q91UZ8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.68■□□□□ 0.74
Pcdhb11Q91UZ8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb11Q91UZ8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb11Q91UZ8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhb11Q91UZ8 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.67■□□□□ 0.74
Pcdhb11Q91UZ8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb11Q91UZ8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb11Q91UZ8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb11Q91UZ8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdhb11Q91UZ8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb11Q91UZ8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.66■□□□□ 0.74
Pcdhb11Q91UZ8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhb11Q91UZ8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb11Q91UZ8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb11Q91UZ8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb11Q91UZ8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb11Q91UZ8 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.66■□□□□ 0.74
Pcdhb11Q91UZ8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb11Q91UZ8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb11Q91UZ8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb11Q91UZ8 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.65■□□□□ 0.74
Pcdhb11Q91UZ8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb11Q91UZ8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb11Q91UZ8 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.65■□□□□ 0.74
Pcdhb11Q91UZ8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.65■□□□□ 0.74
Pcdhb11Q91UZ8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb11Q91UZ8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.65■□□□□ 0.74
Pcdhb11Q91UZ8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.65■□□□□ 0.74
Pcdhb11Q91UZ8 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb11Q91UZ8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.65■□□□□ 0.74
Pcdhb11Q91UZ8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Pcdhb11Q91UZ8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb11Q91UZ8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb11Q91UZ8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb11Q91UZ8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb11Q91UZ8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.64■□□□□ 0.73
Pcdhb11Q91UZ8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.64■□□□□ 0.73
Pcdhb11Q91UZ8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb11Q91UZ8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb11Q91UZ8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb11Q91UZ8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb11Q91UZ8 Golph3-202ENSMUST00000226517 2359 ntBASIC19.64■□□□□ 0.73
Pcdhb11Q91UZ8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb11Q91UZ8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Pcdhb11Q91UZ8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb11Q91UZ8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb11Q91UZ8 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.63■□□□□ 0.73
Pcdhb11Q91UZ8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb11Q91UZ8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb11Q91UZ8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
Pcdhb11Q91UZ8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb11Q91UZ8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb11Q91UZ8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Pcdhb11Q91UZ8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdhb11Q91UZ8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb11Q91UZ8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb11Q91UZ8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb11Q91UZ8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb11Q91UZ8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb11Q91UZ8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pcdhb11Q91UZ8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdhb11Q91UZ8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb11Q91UZ8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb11Q91UZ8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb11Q91UZ8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb11Q91UZ8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb11Q91UZ8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb11Q91UZ8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb11Q91UZ8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb11Q91UZ8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb11Q91UZ8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb11Q91UZ8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhb11Q91UZ8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb11Q91UZ8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhb11Q91UZ8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhb11Q91UZ8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb11Q91UZ8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb11Q91UZ8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb11Q91UZ8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb11Q91UZ8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb11Q91UZ8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb11Q91UZ8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb11Q91UZ8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb11Q91UZ8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb11Q91UZ8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb11Q91UZ8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb11Q91UZ8 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhb11Q91UZ8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms