Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rab40cQ8VHQ4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rab40cQ8VHQ4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rab40cQ8VHQ4 AA386476-201ENSMUST00000098781 1665 ntBASIC15.67■□□□□ 0.1
Rab40cQ8VHQ4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rab40cQ8VHQ4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rab40cQ8VHQ4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rab40cQ8VHQ4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rab40cQ8VHQ4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Rab40cQ8VHQ4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rab40cQ8VHQ4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rab40cQ8VHQ4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rab40cQ8VHQ4 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rab40cQ8VHQ4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Rab40cQ8VHQ4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rab40cQ8VHQ4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Rab40cQ8VHQ4 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.66■□□□□ 0.1
Rab40cQ8VHQ4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rab40cQ8VHQ4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rab40cQ8VHQ4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.66■□□□□ 0.1
Rab40cQ8VHQ4 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.66■□□□□ 0.1
Rab40cQ8VHQ4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rab40cQ8VHQ4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rab40cQ8VHQ4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Rab40cQ8VHQ4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rab40cQ8VHQ4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rab40cQ8VHQ4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rab40cQ8VHQ4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rab40cQ8VHQ4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rab40cQ8VHQ4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Rab40cQ8VHQ4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.65■□□□□ 0.1
Rab40cQ8VHQ4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Rab40cQ8VHQ4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Rab40cQ8VHQ4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rab40cQ8VHQ4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rab40cQ8VHQ4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rab40cQ8VHQ4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rab40cQ8VHQ4 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.65■□□□□ 0.1
Rab40cQ8VHQ4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rab40cQ8VHQ4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rab40cQ8VHQ4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rab40cQ8VHQ4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rab40cQ8VHQ4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rab40cQ8VHQ4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Rab40cQ8VHQ4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.64■□□□□ 0.09
Rab40cQ8VHQ4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rab40cQ8VHQ4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rab40cQ8VHQ4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Rab40cQ8VHQ4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rab40cQ8VHQ4 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.63■□□□□ 0.09
Rab40cQ8VHQ4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rab40cQ8VHQ4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rab40cQ8VHQ4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rab40cQ8VHQ4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.63■□□□□ 0.09
Rab40cQ8VHQ4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rab40cQ8VHQ4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rab40cQ8VHQ4 Gm10232-201ENSMUST00000089221 720 ntBASIC15.63■□□□□ 0.09
Rab40cQ8VHQ4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rab40cQ8VHQ4 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rab40cQ8VHQ4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rab40cQ8VHQ4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rab40cQ8VHQ4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rab40cQ8VHQ4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rab40cQ8VHQ4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rab40cQ8VHQ4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.63■□□□□ 0.09
Rab40cQ8VHQ4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rab40cQ8VHQ4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rab40cQ8VHQ4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.61■□□□□ 0.09
Rab40cQ8VHQ4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rab40cQ8VHQ4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rab40cQ8VHQ4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rab40cQ8VHQ4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rab40cQ8VHQ4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rab40cQ8VHQ4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rab40cQ8VHQ4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rab40cQ8VHQ4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.61■□□□□ 0.09
Rab40cQ8VHQ4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Rab40cQ8VHQ4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rab40cQ8VHQ4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rab40cQ8VHQ4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms