Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rprd1aQ8VDS4 Gm42642-201ENSMUST00000200683 355 ntBASIC19.73■□□□□ 0.75
Rprd1aQ8VDS4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.73■□□□□ 0.75
Rprd1aQ8VDS4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.73■□□□□ 0.75
Rprd1aQ8VDS4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Rprd1aQ8VDS4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rprd1aQ8VDS4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rprd1aQ8VDS4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rprd1aQ8VDS4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rprd1aQ8VDS4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rprd1aQ8VDS4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rprd1aQ8VDS4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rprd1aQ8VDS4 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.72■□□□□ 0.75
Rprd1aQ8VDS4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.72■□□□□ 0.75
Rprd1aQ8VDS4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rprd1aQ8VDS4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rprd1aQ8VDS4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rprd1aQ8VDS4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rprd1aQ8VDS4 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Rprd1aQ8VDS4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rprd1aQ8VDS4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rprd1aQ8VDS4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rprd1aQ8VDS4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.71■□□□□ 0.75
Rprd1aQ8VDS4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rprd1aQ8VDS4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rprd1aQ8VDS4 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Rprd1aQ8VDS4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rprd1aQ8VDS4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rprd1aQ8VDS4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rprd1aQ8VDS4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rprd1aQ8VDS4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rprd1aQ8VDS4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rprd1aQ8VDS4 Reep4-203ENSMUST00000226563 1444 ntBASIC19.7■□□□□ 0.74
Rprd1aQ8VDS4 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rprd1aQ8VDS4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rprd1aQ8VDS4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rprd1aQ8VDS4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rprd1aQ8VDS4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rprd1aQ8VDS4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rprd1aQ8VDS4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rprd1aQ8VDS4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rprd1aQ8VDS4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.69■□□□□ 0.74
Rprd1aQ8VDS4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rprd1aQ8VDS4 Gm18671-201ENSMUST00000214826 683 ntBASIC19.69■□□□□ 0.74
Rprd1aQ8VDS4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rprd1aQ8VDS4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rprd1aQ8VDS4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rprd1aQ8VDS4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rprd1aQ8VDS4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rprd1aQ8VDS4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rprd1aQ8VDS4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rprd1aQ8VDS4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rprd1aQ8VDS4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rprd1aQ8VDS4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.68■□□□□ 0.74
Rprd1aQ8VDS4 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rprd1aQ8VDS4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rprd1aQ8VDS4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rprd1aQ8VDS4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.68■□□□□ 0.74
Rprd1aQ8VDS4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rprd1aQ8VDS4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rprd1aQ8VDS4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rprd1aQ8VDS4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rprd1aQ8VDS4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rprd1aQ8VDS4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rprd1aQ8VDS4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rprd1aQ8VDS4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rprd1aQ8VDS4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rprd1aQ8VDS4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.67■□□□□ 0.74
Rprd1aQ8VDS4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Rprd1aQ8VDS4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rprd1aQ8VDS4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rprd1aQ8VDS4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rprd1aQ8VDS4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rprd1aQ8VDS4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rprd1aQ8VDS4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rprd1aQ8VDS4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.66■□□□□ 0.74
Rprd1aQ8VDS4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rprd1aQ8VDS4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.66■□□□□ 0.74
Rprd1aQ8VDS4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rprd1aQ8VDS4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rprd1aQ8VDS4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rprd1aQ8VDS4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rprd1aQ8VDS4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.65■□□□□ 0.74
Rprd1aQ8VDS4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rprd1aQ8VDS4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rprd1aQ8VDS4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rprd1aQ8VDS4 Gm13234-201ENSMUST00000120010 747 ntBASIC19.65■□□□□ 0.74
Rprd1aQ8VDS4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rprd1aQ8VDS4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
Rprd1aQ8VDS4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rprd1aQ8VDS4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rprd1aQ8VDS4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rprd1aQ8VDS4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rprd1aQ8VDS4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rprd1aQ8VDS4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rprd1aQ8VDS4 Gm26571-201ENSMUST00000181399 666 ntBASIC19.64■□□□□ 0.73
Rprd1aQ8VDS4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.64■□□□□ 0.73
Rprd1aQ8VDS4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.64■□□□□ 0.73
Rprd1aQ8VDS4 Gm10033-202ENSMUST00000211874 928 ntBASIC19.64■□□□□ 0.73
Rprd1aQ8VDS4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms