Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Chrna3Q8R4G9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Chrna3Q8R4G9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Chrna3Q8R4G9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chrna3Q8R4G9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chrna3Q8R4G9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Chrna3Q8R4G9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.86■□□□□ 0.61
Chrna3Q8R4G9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Chrna3Q8R4G9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Chrna3Q8R4G9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Chrna3Q8R4G9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna3Q8R4G9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna3Q8R4G9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna3Q8R4G9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna3Q8R4G9 Gm13234-201ENSMUST00000120010 747 ntBASIC18.85■□□□□ 0.61
Chrna3Q8R4G9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna3Q8R4G9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna3Q8R4G9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Chrna3Q8R4G9 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chrna3Q8R4G9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.84■□□□□ 0.61
Chrna3Q8R4G9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chrna3Q8R4G9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chrna3Q8R4G9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chrna3Q8R4G9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.84■□□□□ 0.61
Chrna3Q8R4G9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chrna3Q8R4G9 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.84■□□□□ 0.61
Chrna3Q8R4G9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chrna3Q8R4G9 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.84■□□□□ 0.61
Chrna3Q8R4G9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Chrna3Q8R4G9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.83■□□□□ 0.61
Chrna3Q8R4G9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chrna3Q8R4G9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chrna3Q8R4G9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chrna3Q8R4G9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chrna3Q8R4G9 Gm10849-201ENSMUST00000100397 618 ntBASIC18.83■□□□□ 0.6
Chrna3Q8R4G9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.83■□□□□ 0.6
Chrna3Q8R4G9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.83■□□□□ 0.6
Chrna3Q8R4G9 AV356131-201ENSMUST00000206201 750 ntBASIC18.83■□□□□ 0.6
Chrna3Q8R4G9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chrna3Q8R4G9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Chrna3Q8R4G9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Chrna3Q8R4G9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chrna3Q8R4G9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chrna3Q8R4G9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chrna3Q8R4G9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Chrna3Q8R4G9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chrna3Q8R4G9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.82■□□□□ 0.6
Chrna3Q8R4G9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chrna3Q8R4G9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.82■□□□□ 0.6
Chrna3Q8R4G9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.82■□□□□ 0.6
Chrna3Q8R4G9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.82■□□□□ 0.6
Chrna3Q8R4G9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chrna3Q8R4G9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Chrna3Q8R4G9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Chrna3Q8R4G9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.82■□□□□ 0.6
Chrna3Q8R4G9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Chrna3Q8R4G9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna3Q8R4G9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.81■□□□□ 0.6
Chrna3Q8R4G9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna3Q8R4G9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Chrna3Q8R4G9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna3Q8R4G9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Chrna3Q8R4G9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna3Q8R4G9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna3Q8R4G9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chrna3Q8R4G9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna3Q8R4G9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Chrna3Q8R4G9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna3Q8R4G9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.8■□□□□ 0.6
Chrna3Q8R4G9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna3Q8R4G9 Gm27405-201ENSMUST00000184201 112 ntBASIC18.8■□□□□ 0.6
Chrna3Q8R4G9 Gm7291-201ENSMUST00000199147 382 ntBASIC18.8■□□□□ 0.6
Chrna3Q8R4G9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.8■□□□□ 0.6
Chrna3Q8R4G9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
Chrna3Q8R4G9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Chrna3Q8R4G9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna3Q8R4G9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna3Q8R4G9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chrna3Q8R4G9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Chrna3Q8R4G9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna3Q8R4G9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Chrna3Q8R4G9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna3Q8R4G9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna3Q8R4G9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna3Q8R4G9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.79■□□□□ 0.6
Chrna3Q8R4G9 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.79■□□□□ 0.6
Chrna3Q8R4G9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna3Q8R4G9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.79■□□□□ 0.6
Chrna3Q8R4G9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna3Q8R4G9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chrna3Q8R4G9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Chrna3Q8R4G9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.79■□□□□ 0.6
Chrna3Q8R4G9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna3Q8R4G9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna3Q8R4G9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Chrna3Q8R4G9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna3Q8R4G9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Chrna3Q8R4G9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.78■□□□□ 0.6
Chrna3Q8R4G9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chrna3Q8R4G9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 971.6 ms