Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cacnb1Q8R3Z5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cacnb1Q8R3Z5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cacnb1Q8R3Z5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cacnb1Q8R3Z5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.4■■□□□ 1.02
Cacnb1Q8R3Z5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cacnb1Q8R3Z5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cacnb1Q8R3Z5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cacnb1Q8R3Z5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cacnb1Q8R3Z5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cacnb1Q8R3Z5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cacnb1Q8R3Z5 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.39■■□□□ 1.01
Cacnb1Q8R3Z5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cacnb1Q8R3Z5 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Cacnb1Q8R3Z5 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cacnb1Q8R3Z5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cacnb1Q8R3Z5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cacnb1Q8R3Z5 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cacnb1Q8R3Z5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cacnb1Q8R3Z5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cacnb1Q8R3Z5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cacnb1Q8R3Z5 Gm12106-201ENSMUST00000116006 1200 ntBASIC21.38■■□□□ 1.01
Cacnb1Q8R3Z5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.38■■□□□ 1.01
Cacnb1Q8R3Z5 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
Cacnb1Q8R3Z5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Cacnb1Q8R3Z5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cacnb1Q8R3Z5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cacnb1Q8R3Z5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cacnb1Q8R3Z5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cacnb1Q8R3Z5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cacnb1Q8R3Z5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cacnb1Q8R3Z5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cacnb1Q8R3Z5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cacnb1Q8R3Z5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.37■■□□□ 1.01
Cacnb1Q8R3Z5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cacnb1Q8R3Z5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cacnb1Q8R3Z5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cacnb1Q8R3Z5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
Cacnb1Q8R3Z5 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cacnb1Q8R3Z5 Gm43553-201ENSMUST00000200900 685 ntBASIC21.37■■□□□ 1.01
Cacnb1Q8R3Z5 AC160962.2-201ENSMUST00000224761 632 ntBASIC21.37■■□□□ 1.01
Cacnb1Q8R3Z5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cacnb1Q8R3Z5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cacnb1Q8R3Z5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cacnb1Q8R3Z5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cacnb1Q8R3Z5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cacnb1Q8R3Z5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cacnb1Q8R3Z5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cacnb1Q8R3Z5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cacnb1Q8R3Z5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cacnb1Q8R3Z5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Cacnb1Q8R3Z5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cacnb1Q8R3Z5 Gm37866-201ENSMUST00000191950 696 ntBASIC21.36■■□□□ 1.01
Cacnb1Q8R3Z5 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.36■■□□□ 1.01
Cacnb1Q8R3Z5 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cacnb1Q8R3Z5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cacnb1Q8R3Z5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cacnb1Q8R3Z5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.36■■□□□ 1.01
Cacnb1Q8R3Z5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cacnb1Q8R3Z5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cacnb1Q8R3Z5 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cacnb1Q8R3Z5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Cacnb1Q8R3Z5 Gm43060-201ENSMUST00000200621 289 ntBASIC21.35■■□□□ 1.01
Cacnb1Q8R3Z5 Gm44953-201ENSMUST00000208745 1286 ntBASIC21.35■■□□□ 1.01
Cacnb1Q8R3Z5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cacnb1Q8R3Z5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cacnb1Q8R3Z5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cacnb1Q8R3Z5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Cacnb1Q8R3Z5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cacnb1Q8R3Z5 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Cacnb1Q8R3Z5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
Cacnb1Q8R3Z5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cacnb1Q8R3Z5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Cacnb1Q8R3Z5 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cacnb1Q8R3Z5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cacnb1Q8R3Z5 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.34■■□□□ 1.01
Cacnb1Q8R3Z5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.34■■□□□ 1.01
Cacnb1Q8R3Z5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cacnb1Q8R3Z5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cacnb1Q8R3Z5 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Cacnb1Q8R3Z5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cacnb1Q8R3Z5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Cacnb1Q8R3Z5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cacnb1Q8R3Z5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cacnb1Q8R3Z5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Cacnb1Q8R3Z5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.33■■□□□ 1.01
Cacnb1Q8R3Z5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
Cacnb1Q8R3Z5 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC21.33■■□□□ 1.01
Cacnb1Q8R3Z5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cacnb1Q8R3Z5 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Cacnb1Q8R3Z5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
Cacnb1Q8R3Z5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cacnb1Q8R3Z5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.33■■□□□ 1
Cacnb1Q8R3Z5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cacnb1Q8R3Z5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Cacnb1Q8R3Z5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Cacnb1Q8R3Z5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Cacnb1Q8R3Z5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Cacnb1Q8R3Z5 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC21.32■■□□□ 1
Cacnb1Q8R3Z5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms