Protein–RNA interactions for Protein: Q8R0W1

Cipc, CLOCK-interacting pacemaker, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CipcQ8R0W1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CipcQ8R0W1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.11■□□□□ 0.49
CipcQ8R0W1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.11■□□□□ 0.49
CipcQ8R0W1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CipcQ8R0W1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CipcQ8R0W1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CipcQ8R0W1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CipcQ8R0W1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.11■□□□□ 0.49
CipcQ8R0W1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CipcQ8R0W1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CipcQ8R0W1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CipcQ8R0W1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CipcQ8R0W1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.1■□□□□ 0.49
CipcQ8R0W1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CipcQ8R0W1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CipcQ8R0W1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CipcQ8R0W1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CipcQ8R0W1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CipcQ8R0W1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CipcQ8R0W1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.1■□□□□ 0.49
CipcQ8R0W1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
CipcQ8R0W1 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CipcQ8R0W1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CipcQ8R0W1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CipcQ8R0W1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CipcQ8R0W1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CipcQ8R0W1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CipcQ8R0W1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.09■□□□□ 0.49
CipcQ8R0W1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CipcQ8R0W1 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.09■□□□□ 0.49
CipcQ8R0W1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CipcQ8R0W1 Gm9988-201ENSMUST00000069786 435 ntBASIC18.09■□□□□ 0.49
CipcQ8R0W1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CipcQ8R0W1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CipcQ8R0W1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CipcQ8R0W1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CipcQ8R0W1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CipcQ8R0W1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CipcQ8R0W1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CipcQ8R0W1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CipcQ8R0W1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CipcQ8R0W1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CipcQ8R0W1 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CipcQ8R0W1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.08■□□□□ 0.48
CipcQ8R0W1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CipcQ8R0W1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CipcQ8R0W1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CipcQ8R0W1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.08■□□□□ 0.48
CipcQ8R0W1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CipcQ8R0W1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CipcQ8R0W1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CipcQ8R0W1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CipcQ8R0W1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
CipcQ8R0W1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CipcQ8R0W1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CipcQ8R0W1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CipcQ8R0W1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CipcQ8R0W1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CipcQ8R0W1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.06■□□□□ 0.48
CipcQ8R0W1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.06■□□□□ 0.48
CipcQ8R0W1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.06■□□□□ 0.48
CipcQ8R0W1 Gm42778-201ENSMUST00000199644 553 ntBASIC18.06■□□□□ 0.48
CipcQ8R0W1 Gm42642-201ENSMUST00000200683 355 ntBASIC18.06■□□□□ 0.48
CipcQ8R0W1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CipcQ8R0W1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CipcQ8R0W1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CipcQ8R0W1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CipcQ8R0W1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CipcQ8R0W1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CipcQ8R0W1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CipcQ8R0W1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CipcQ8R0W1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CipcQ8R0W1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CipcQ8R0W1 AA386476-201ENSMUST00000098781 1665 ntBASIC18.06■□□□□ 0.48
CipcQ8R0W1 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.05■□□□□ 0.48
CipcQ8R0W1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CipcQ8R0W1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CipcQ8R0W1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CipcQ8R0W1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.05■□□□□ 0.48
CipcQ8R0W1 Gm27801-201ENSMUST00000184174 223 ntBASIC18.05■□□□□ 0.48
CipcQ8R0W1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
CipcQ8R0W1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CipcQ8R0W1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.05■□□□□ 0.48
CipcQ8R0W1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CipcQ8R0W1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CipcQ8R0W1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CipcQ8R0W1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CipcQ8R0W1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CipcQ8R0W1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CipcQ8R0W1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CipcQ8R0W1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.04■□□□□ 0.48
CipcQ8R0W1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.04■□□□□ 0.48
CipcQ8R0W1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.04■□□□□ 0.48
CipcQ8R0W1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.04■□□□□ 0.48
CipcQ8R0W1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CipcQ8R0W1 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.04■□□□□ 0.48
CipcQ8R0W1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CipcQ8R0W1 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CipcQ8R0W1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CipcQ8R0W1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms