Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Ddx54Q8K4L0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Ddx54Q8K4L0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
Ddx54Q8K4L0 Gm21362-201ENSMUST00000194272 928 ntBASIC25.39■■□□□ 1.66
Ddx54Q8K4L0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC25.39■■□□□ 1.66
Ddx54Q8K4L0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ddx54Q8K4L0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ddx54Q8K4L0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
Ddx54Q8K4L0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx54Q8K4L0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx54Q8K4L0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
Ddx54Q8K4L0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC25.38■■□□□ 1.65
Ddx54Q8K4L0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx54Q8K4L0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx54Q8K4L0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Ddx54Q8K4L0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx54Q8K4L0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx54Q8K4L0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx54Q8K4L0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ddx54Q8K4L0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC25.37■■□□□ 1.65
Ddx54Q8K4L0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Ddx54Q8K4L0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ddx54Q8K4L0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ddx54Q8K4L0 Gm2399-201ENSMUST00000104944 225 ntBASIC25.36■■□□□ 1.65
Ddx54Q8K4L0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ddx54Q8K4L0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC25.36■■□□□ 1.65
Ddx54Q8K4L0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Ddx54Q8K4L0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ddx54Q8K4L0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ddx54Q8K4L0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Ddx54Q8K4L0 Gm6433-201ENSMUST00000118634 875 ntBASIC25.35■■□□□ 1.65
Ddx54Q8K4L0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
Ddx54Q8K4L0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Ddx54Q8K4L0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC25.35■■□□□ 1.65
Ddx54Q8K4L0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ddx54Q8K4L0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ddx54Q8K4L0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC25.34■■□□□ 1.65
Ddx54Q8K4L0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ddx54Q8K4L0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC25.34■■□□□ 1.65
Ddx54Q8K4L0 H2-K2-201ENSMUST00000174250 1049 ntBASIC25.34■■□□□ 1.65
Ddx54Q8K4L0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ddx54Q8K4L0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ddx54Q8K4L0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ddx54Q8K4L0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ddx54Q8K4L0 Gm43909-201ENSMUST00000203443 1876 ntBASIC25.34■■□□□ 1.65
Ddx54Q8K4L0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Ddx54Q8K4L0 Gm10167-201ENSMUST00000150411 1479 ntBASIC25.34■■□□□ 1.65
Ddx54Q8K4L0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC25.33■■□□□ 1.65
Ddx54Q8K4L0 Gm43799-201ENSMUST00000201845 579 ntBASIC25.33■■□□□ 1.65
Ddx54Q8K4L0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC25.33■■□□□ 1.65
Ddx54Q8K4L0 Gm44549-201ENSMUST00000208351 577 ntBASIC25.33■■□□□ 1.65
Ddx54Q8K4L0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC25.33■■□□□ 1.65
Ddx54Q8K4L0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ddx54Q8K4L0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ddx54Q8K4L0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ddx54Q8K4L0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Ddx54Q8K4L0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ddx54Q8K4L0 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ddx54Q8K4L0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ddx54Q8K4L0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Ddx54Q8K4L0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ddx54Q8K4L0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Ddx54Q8K4L0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ddx54Q8K4L0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ddx54Q8K4L0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ddx54Q8K4L0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ddx54Q8K4L0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ddx54Q8K4L0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Ddx54Q8K4L0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC25.32■■□□□ 1.64
Ddx54Q8K4L0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Ddx54Q8K4L0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ddx54Q8K4L0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Ddx54Q8K4L0 Gm27032-201ENSMUST00000183124 1116 ntBASIC25.31■■□□□ 1.64
Ddx54Q8K4L0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ddx54Q8K4L0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC25.31■■□□□ 1.64
Ddx54Q8K4L0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ddx54Q8K4L0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
Ddx54Q8K4L0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC25.3■■□□□ 1.64
Ddx54Q8K4L0 Gm10459-201ENSMUST00000202708 1155 ntBASIC25.3■■□□□ 1.64
Ddx54Q8K4L0 Gm5417-201ENSMUST00000079706 384 ntBASIC25.3■■□□□ 1.64
Ddx54Q8K4L0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ddx54Q8K4L0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ddx54Q8K4L0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ddx54Q8K4L0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ddx54Q8K4L0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ddx54Q8K4L0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ddx54Q8K4L0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Ddx54Q8K4L0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ddx54Q8K4L0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ddx54Q8K4L0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ddx54Q8K4L0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC25.29■■□□□ 1.64
Ddx54Q8K4L0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ddx54Q8K4L0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ddx54Q8K4L0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ddx54Q8K4L0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC25.28■■□□□ 1.64
Ddx54Q8K4L0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Ddx54Q8K4L0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ddx54Q8K4L0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
Ddx54Q8K4L0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ddx54Q8K4L0 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms