Protein–RNA interactions for Protein: Q8K2X2

Rbm48, RNA-binding protein 48, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm48Q8K2X2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rbm48Q8K2X2 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rbm48Q8K2X2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rbm48Q8K2X2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rbm48Q8K2X2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rbm48Q8K2X2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rbm48Q8K2X2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Rbm48Q8K2X2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rbm48Q8K2X2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Rbm48Q8K2X2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.04■□□□□ 0.16
Rbm48Q8K2X2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbm48Q8K2X2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbm48Q8K2X2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbm48Q8K2X2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbm48Q8K2X2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rbm48Q8K2X2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbm48Q8K2X2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbm48Q8K2X2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbm48Q8K2X2 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.04■□□□□ 0.16
Rbm48Q8K2X2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.04■□□□□ 0.16
Rbm48Q8K2X2 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Rbm48Q8K2X2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbm48Q8K2X2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbm48Q8K2X2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbm48Q8K2X2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Rbm48Q8K2X2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Rbm48Q8K2X2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.03■□□□□ 0.16
Rbm48Q8K2X2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rbm48Q8K2X2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rbm48Q8K2X2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rbm48Q8K2X2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Rbm48Q8K2X2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rbm48Q8K2X2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rbm48Q8K2X2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rbm48Q8K2X2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rbm48Q8K2X2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rbm48Q8K2X2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Rbm48Q8K2X2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.03■□□□□ 0.16
Rbm48Q8K2X2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Rbm48Q8K2X2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rbm48Q8K2X2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rbm48Q8K2X2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rbm48Q8K2X2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rbm48Q8K2X2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rbm48Q8K2X2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rbm48Q8K2X2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Rbm48Q8K2X2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Rbm48Q8K2X2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rbm48Q8K2X2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.02■□□□□ 0.16
Rbm48Q8K2X2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rbm48Q8K2X2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Rbm48Q8K2X2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rbm48Q8K2X2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rbm48Q8K2X2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rbm48Q8K2X2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
Rbm48Q8K2X2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Rbm48Q8K2X2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rbm48Q8K2X2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Rbm48Q8K2X2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rbm48Q8K2X2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rbm48Q8K2X2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Rbm48Q8K2X2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Rbm48Q8K2X2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rbm48Q8K2X2 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.01■□□□□ 0.15
Rbm48Q8K2X2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rbm48Q8K2X2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rbm48Q8K2X2 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.01■□□□□ 0.15
Rbm48Q8K2X2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.01■□□□□ 0.15
Rbm48Q8K2X2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.01■□□□□ 0.15
Rbm48Q8K2X2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rbm48Q8K2X2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.01■□□□□ 0.15
Rbm48Q8K2X2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.01■□□□□ 0.15
Rbm48Q8K2X2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rbm48Q8K2X2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Rbm48Q8K2X2 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Rbm48Q8K2X2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Rbm48Q8K2X2 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Rbm48Q8K2X2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Rbm48Q8K2X2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms