Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rtn4rl1Q8K0S5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4rl1Q8K0S5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4rl1Q8K0S5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Rtn4rl1Q8K0S5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4rl1Q8K0S5 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.57■□□□□ 0.72
Rtn4rl1Q8K0S5 Gm27275-201ENSMUST00000184318 272 ntBASIC19.57■□□□□ 0.72
Rtn4rl1Q8K0S5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4rl1Q8K0S5 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Rtn4rl1Q8K0S5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4rl1Q8K0S5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4rl1Q8K0S5 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rtn4rl1Q8K0S5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4rl1Q8K0S5 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4rl1Q8K0S5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rtn4rl1Q8K0S5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4rl1Q8K0S5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.56■□□□□ 0.72
Rtn4rl1Q8K0S5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4rl1Q8K0S5 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Rtn4rl1Q8K0S5 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Rtn4rl1Q8K0S5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4rl1Q8K0S5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4rl1Q8K0S5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4rl1Q8K0S5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.56■□□□□ 0.72
Rtn4rl1Q8K0S5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Rtn4rl1Q8K0S5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4rl1Q8K0S5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rtn4rl1Q8K0S5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn4rl1Q8K0S5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn4rl1Q8K0S5 Mir7071-201ENSMUST00000184847 69 ntBASIC19.55■□□□□ 0.72
Rtn4rl1Q8K0S5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rtn4rl1Q8K0S5 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Rtn4rl1Q8K0S5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn4rl1Q8K0S5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn4rl1Q8K0S5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn4rl1Q8K0S5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rtn4rl1Q8K0S5 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn4rl1Q8K0S5 Gm12896-201ENSMUST00000118430 226 ntBASIC19.54■□□□□ 0.72
Rtn4rl1Q8K0S5 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn4rl1Q8K0S5 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.54■□□□□ 0.72
Rtn4rl1Q8K0S5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn4rl1Q8K0S5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.54■□□□□ 0.72
Rtn4rl1Q8K0S5 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.54■□□□□ 0.72
Rtn4rl1Q8K0S5 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn4rl1Q8K0S5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rtn4rl1Q8K0S5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Rtn4rl1Q8K0S5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn4rl1Q8K0S5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.53■□□□□ 0.72
Rtn4rl1Q8K0S5 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn4rl1Q8K0S5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Rtn4rl1Q8K0S5 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn4rl1Q8K0S5 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn4rl1Q8K0S5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Rtn4rl1Q8K0S5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn4rl1Q8K0S5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Rtn4rl1Q8K0S5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rtn4rl1Q8K0S5 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn4rl1Q8K0S5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn4rl1Q8K0S5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn4rl1Q8K0S5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn4rl1Q8K0S5 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.52■□□□□ 0.72
Rtn4rl1Q8K0S5 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn4rl1Q8K0S5 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rtn4rl1Q8K0S5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rtn4rl1Q8K0S5 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn4rl1Q8K0S5 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn4rl1Q8K0S5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn4rl1Q8K0S5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn4rl1Q8K0S5 Mir6982-201ENSMUST00000184354 68 ntBASIC19.51■□□□□ 0.71
Rtn4rl1Q8K0S5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn4rl1Q8K0S5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn4rl1Q8K0S5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rtn4rl1Q8K0S5 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtn4rl1Q8K0S5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rtn4rl1Q8K0S5 Gm5643-201ENSMUST00000117081 966 ntBASIC19.5■□□□□ 0.71
Rtn4rl1Q8K0S5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rtn4rl1Q8K0S5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rtn4rl1Q8K0S5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtn4rl1Q8K0S5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Rtn4rl1Q8K0S5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rtn4rl1Q8K0S5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtn4rl1Q8K0S5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rtn4rl1Q8K0S5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rtn4rl1Q8K0S5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtn4rl1Q8K0S5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.49■□□□□ 0.71
Rtn4rl1Q8K0S5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtn4rl1Q8K0S5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rtn4rl1Q8K0S5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rtn4rl1Q8K0S5 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.48■□□□□ 0.71
Rtn4rl1Q8K0S5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtn4rl1Q8K0S5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtn4rl1Q8K0S5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtn4rl1Q8K0S5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.48■□□□□ 0.71
Rtn4rl1Q8K0S5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtn4rl1Q8K0S5 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtn4rl1Q8K0S5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtn4rl1Q8K0S5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtn4rl1Q8K0S5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rtn4rl1Q8K0S5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rtn4rl1Q8K0S5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms