Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rdh1Q8CGV4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rdh1Q8CGV4 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rdh1Q8CGV4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rdh1Q8CGV4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rdh1Q8CGV4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rdh1Q8CGV4 Gm12933-201ENSMUST00000120203 872 ntBASIC18.7■□□□□ 0.58
Rdh1Q8CGV4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rdh1Q8CGV4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Rdh1Q8CGV4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rdh1Q8CGV4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Rdh1Q8CGV4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rdh1Q8CGV4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rdh1Q8CGV4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rdh1Q8CGV4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rdh1Q8CGV4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rdh1Q8CGV4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Rdh1Q8CGV4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rdh1Q8CGV4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rdh1Q8CGV4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rdh1Q8CGV4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rdh1Q8CGV4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rdh1Q8CGV4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rdh1Q8CGV4 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
Rdh1Q8CGV4 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Rdh1Q8CGV4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rdh1Q8CGV4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.69■□□□□ 0.58
Rdh1Q8CGV4 Gm10602-201ENSMUST00000098239 609 ntBASIC18.69■□□□□ 0.58
Rdh1Q8CGV4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Rdh1Q8CGV4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.69■□□□□ 0.58
Rdh1Q8CGV4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rdh1Q8CGV4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.69■□□□□ 0.58
Rdh1Q8CGV4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rdh1Q8CGV4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rdh1Q8CGV4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rdh1Q8CGV4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.68■□□□□ 0.58
Rdh1Q8CGV4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.68■□□□□ 0.58
Rdh1Q8CGV4 Gm13534-201ENSMUST00000121169 513 ntBASIC18.68■□□□□ 0.58
Rdh1Q8CGV4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.68■□□□□ 0.58
Rdh1Q8CGV4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rdh1Q8CGV4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rdh1Q8CGV4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rdh1Q8CGV4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Rdh1Q8CGV4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rdh1Q8CGV4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Rdh1Q8CGV4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rdh1Q8CGV4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rdh1Q8CGV4 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.67■□□□□ 0.58
Rdh1Q8CGV4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rdh1Q8CGV4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rdh1Q8CGV4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rdh1Q8CGV4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rdh1Q8CGV4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rdh1Q8CGV4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rdh1Q8CGV4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rdh1Q8CGV4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rdh1Q8CGV4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rdh1Q8CGV4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.66■□□□□ 0.58
Rdh1Q8CGV4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rdh1Q8CGV4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rdh1Q8CGV4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rdh1Q8CGV4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rdh1Q8CGV4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rdh1Q8CGV4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rdh1Q8CGV4 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.65■□□□□ 0.58
Rdh1Q8CGV4 Nespas-201ENSMUST00000143738 1083 ntBASIC18.65■□□□□ 0.58
Rdh1Q8CGV4 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rdh1Q8CGV4 Gm6420-201ENSMUST00000193885 723 ntBASIC18.65■□□□□ 0.58
Rdh1Q8CGV4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.65■□□□□ 0.58
Rdh1Q8CGV4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rdh1Q8CGV4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rdh1Q8CGV4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rdh1Q8CGV4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rdh1Q8CGV4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rdh1Q8CGV4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Rdh1Q8CGV4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rdh1Q8CGV4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rdh1Q8CGV4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rdh1Q8CGV4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rdh1Q8CGV4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rdh1Q8CGV4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rdh1Q8CGV4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rdh1Q8CGV4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rdh1Q8CGV4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rdh1Q8CGV4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
Rdh1Q8CGV4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rdh1Q8CGV4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh1Q8CGV4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh1Q8CGV4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh1Q8CGV4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh1Q8CGV4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh1Q8CGV4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh1Q8CGV4 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.63■□□□□ 0.57
Rdh1Q8CGV4 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh1Q8CGV4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh1Q8CGV4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rdh1Q8CGV4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rdh1Q8CGV4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Rdh1Q8CGV4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Rdh1Q8CGV4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 884 ms