Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rp1l1Q8CGM2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rp1l1Q8CGM2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
Rp1l1Q8CGM2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rp1l1Q8CGM2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rp1l1Q8CGM2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.29■□□□□ 0.84
Rp1l1Q8CGM2 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.29■□□□□ 0.84
Rp1l1Q8CGM2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rp1l1Q8CGM2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rp1l1Q8CGM2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rp1l1Q8CGM2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Rp1l1Q8CGM2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rp1l1Q8CGM2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Rp1l1Q8CGM2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rp1l1Q8CGM2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rp1l1Q8CGM2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rp1l1Q8CGM2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rp1l1Q8CGM2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rp1l1Q8CGM2 Gm2399-201ENSMUST00000104944 225 ntBASIC20.28■□□□□ 0.84
Rp1l1Q8CGM2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Rp1l1Q8CGM2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.28■□□□□ 0.84
Rp1l1Q8CGM2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rp1l1Q8CGM2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rp1l1Q8CGM2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rp1l1Q8CGM2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rp1l1Q8CGM2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Rp1l1Q8CGM2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.27■□□□□ 0.84
Rp1l1Q8CGM2 Mir5122-201ENSMUST00000175004 89 ntBASIC20.27■□□□□ 0.84
Rp1l1Q8CGM2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rp1l1Q8CGM2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rp1l1Q8CGM2 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.27■□□□□ 0.84
Rp1l1Q8CGM2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rp1l1Q8CGM2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rp1l1Q8CGM2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rp1l1Q8CGM2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rp1l1Q8CGM2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Rp1l1Q8CGM2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rp1l1Q8CGM2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rp1l1Q8CGM2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rp1l1Q8CGM2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rp1l1Q8CGM2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rp1l1Q8CGM2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rp1l1Q8CGM2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rp1l1Q8CGM2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rp1l1Q8CGM2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.25■□□□□ 0.83
Rp1l1Q8CGM2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rp1l1Q8CGM2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rp1l1Q8CGM2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rp1l1Q8CGM2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rp1l1Q8CGM2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rp1l1Q8CGM2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rp1l1Q8CGM2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rp1l1Q8CGM2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rp1l1Q8CGM2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rp1l1Q8CGM2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rp1l1Q8CGM2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rp1l1Q8CGM2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rp1l1Q8CGM2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.24■□□□□ 0.83
Rp1l1Q8CGM2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rp1l1Q8CGM2 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.24■□□□□ 0.83
Rp1l1Q8CGM2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.24■□□□□ 0.83
Rp1l1Q8CGM2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Rp1l1Q8CGM2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rp1l1Q8CGM2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rp1l1Q8CGM2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rp1l1Q8CGM2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rp1l1Q8CGM2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rp1l1Q8CGM2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rp1l1Q8CGM2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rp1l1Q8CGM2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rp1l1Q8CGM2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.23■□□□□ 0.83
Rp1l1Q8CGM2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rp1l1Q8CGM2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Rp1l1Q8CGM2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.23■□□□□ 0.83
Rp1l1Q8CGM2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rp1l1Q8CGM2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rp1l1Q8CGM2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.23■□□□□ 0.83
Rp1l1Q8CGM2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rp1l1Q8CGM2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rp1l1Q8CGM2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rp1l1Q8CGM2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Rp1l1Q8CGM2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.22■□□□□ 0.83
Rp1l1Q8CGM2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rp1l1Q8CGM2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rp1l1Q8CGM2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.22■□□□□ 0.83
Rp1l1Q8CGM2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.22■□□□□ 0.83
Rp1l1Q8CGM2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rp1l1Q8CGM2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rp1l1Q8CGM2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rp1l1Q8CGM2 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.21■□□□□ 0.83
Rp1l1Q8CGM2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.21■□□□□ 0.83
Rp1l1Q8CGM2 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.21■□□□□ 0.83
Rp1l1Q8CGM2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rp1l1Q8CGM2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Rp1l1Q8CGM2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rp1l1Q8CGM2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rp1l1Q8CGM2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rp1l1Q8CGM2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rp1l1Q8CGM2 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.21■□□□□ 0.83
Rp1l1Q8CGM2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms