Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cabcoco1Q8CDT7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.85■□□□□ 0.61
Cabcoco1Q8CDT7 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cabcoco1Q8CDT7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.85■□□□□ 0.61
Cabcoco1Q8CDT7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cabcoco1Q8CDT7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cabcoco1Q8CDT7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cabcoco1Q8CDT7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cabcoco1Q8CDT7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cabcoco1Q8CDT7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cabcoco1Q8CDT7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cabcoco1Q8CDT7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cabcoco1Q8CDT7 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Cabcoco1Q8CDT7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cabcoco1Q8CDT7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cabcoco1Q8CDT7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cabcoco1Q8CDT7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cabcoco1Q8CDT7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cabcoco1Q8CDT7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cabcoco1Q8CDT7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cabcoco1Q8CDT7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cabcoco1Q8CDT7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cabcoco1Q8CDT7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cabcoco1Q8CDT7 Gm40881-201ENSMUST00000223397 166 ntBASIC18.83■□□□□ 0.6
Cabcoco1Q8CDT7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cabcoco1Q8CDT7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cabcoco1Q8CDT7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Cabcoco1Q8CDT7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cabcoco1Q8CDT7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cabcoco1Q8CDT7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cabcoco1Q8CDT7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.82■□□□□ 0.6
Cabcoco1Q8CDT7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cabcoco1Q8CDT7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cabcoco1Q8CDT7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cabcoco1Q8CDT7 Gm5921-201ENSMUST00000075898 882 ntBASIC18.82■□□□□ 0.6
Cabcoco1Q8CDT7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cabcoco1Q8CDT7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cabcoco1Q8CDT7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cabcoco1Q8CDT7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cabcoco1Q8CDT7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cabcoco1Q8CDT7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cabcoco1Q8CDT7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.8■□□□□ 0.6
Cabcoco1Q8CDT7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cabcoco1Q8CDT7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cabcoco1Q8CDT7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cabcoco1Q8CDT7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.8■□□□□ 0.6
Cabcoco1Q8CDT7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cabcoco1Q8CDT7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cabcoco1Q8CDT7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.8■□□□□ 0.6
Cabcoco1Q8CDT7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Cabcoco1Q8CDT7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cabcoco1Q8CDT7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cabcoco1Q8CDT7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cabcoco1Q8CDT7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Cabcoco1Q8CDT7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cabcoco1Q8CDT7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cabcoco1Q8CDT7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cabcoco1Q8CDT7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cabcoco1Q8CDT7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cabcoco1Q8CDT7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.79■□□□□ 0.6
Cabcoco1Q8CDT7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.79■□□□□ 0.6
Cabcoco1Q8CDT7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cabcoco1Q8CDT7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cabcoco1Q8CDT7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cabcoco1Q8CDT7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Cabcoco1Q8CDT7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cabcoco1Q8CDT7 AA386476-201ENSMUST00000098781 1665 ntBASIC18.79■□□□□ 0.6
Cabcoco1Q8CDT7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cabcoco1Q8CDT7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cabcoco1Q8CDT7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cabcoco1Q8CDT7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cabcoco1Q8CDT7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cabcoco1Q8CDT7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Cabcoco1Q8CDT7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cabcoco1Q8CDT7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.78■□□□□ 0.6
Cabcoco1Q8CDT7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.78■□□□□ 0.6
Cabcoco1Q8CDT7 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.78■□□□□ 0.6
Cabcoco1Q8CDT7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cabcoco1Q8CDT7 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms