Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vcpip1Q8CDG3 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.59■□□□□ 0.89
Vcpip1Q8CDG3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vcpip1Q8CDG3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Vcpip1Q8CDG3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.59■□□□□ 0.89
Vcpip1Q8CDG3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Vcpip1Q8CDG3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vcpip1Q8CDG3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vcpip1Q8CDG3 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.59■□□□□ 0.89
Vcpip1Q8CDG3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vcpip1Q8CDG3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vcpip1Q8CDG3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vcpip1Q8CDG3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Vcpip1Q8CDG3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vcpip1Q8CDG3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vcpip1Q8CDG3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Vcpip1Q8CDG3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Vcpip1Q8CDG3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Vcpip1Q8CDG3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Vcpip1Q8CDG3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vcpip1Q8CDG3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vcpip1Q8CDG3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Vcpip1Q8CDG3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vcpip1Q8CDG3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vcpip1Q8CDG3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vcpip1Q8CDG3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vcpip1Q8CDG3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Vcpip1Q8CDG3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vcpip1Q8CDG3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vcpip1Q8CDG3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Vcpip1Q8CDG3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Vcpip1Q8CDG3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vcpip1Q8CDG3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vcpip1Q8CDG3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vcpip1Q8CDG3 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.56■□□□□ 0.88
Vcpip1Q8CDG3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vcpip1Q8CDG3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vcpip1Q8CDG3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vcpip1Q8CDG3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vcpip1Q8CDG3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vcpip1Q8CDG3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vcpip1Q8CDG3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vcpip1Q8CDG3 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.56■□□□□ 0.88
Vcpip1Q8CDG3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vcpip1Q8CDG3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vcpip1Q8CDG3 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.56■□□□□ 0.88
Vcpip1Q8CDG3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vcpip1Q8CDG3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vcpip1Q8CDG3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.55■□□□□ 0.88
Vcpip1Q8CDG3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vcpip1Q8CDG3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vcpip1Q8CDG3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vcpip1Q8CDG3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vcpip1Q8CDG3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.55■□□□□ 0.88
Vcpip1Q8CDG3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vcpip1Q8CDG3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.55■□□□□ 0.88
Vcpip1Q8CDG3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.55■□□□□ 0.88
Vcpip1Q8CDG3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.55■□□□□ 0.88
Vcpip1Q8CDG3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vcpip1Q8CDG3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Vcpip1Q8CDG3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.55■□□□□ 0.88
Vcpip1Q8CDG3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vcpip1Q8CDG3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vcpip1Q8CDG3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcpip1Q8CDG3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcpip1Q8CDG3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcpip1Q8CDG3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcpip1Q8CDG3 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vcpip1Q8CDG3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Vcpip1Q8CDG3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcpip1Q8CDG3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcpip1Q8CDG3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcpip1Q8CDG3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcpip1Q8CDG3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcpip1Q8CDG3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcpip1Q8CDG3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcpip1Q8CDG3 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcpip1Q8CDG3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Vcpip1Q8CDG3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcpip1Q8CDG3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vcpip1Q8CDG3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vcpip1Q8CDG3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Vcpip1Q8CDG3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vcpip1Q8CDG3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vcpip1Q8CDG3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vcpip1Q8CDG3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vcpip1Q8CDG3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vcpip1Q8CDG3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vcpip1Q8CDG3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vcpip1Q8CDG3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vcpip1Q8CDG3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vcpip1Q8CDG3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.53■□□□□ 0.88
Vcpip1Q8CDG3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vcpip1Q8CDG3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.53■□□□□ 0.88
Vcpip1Q8CDG3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vcpip1Q8CDG3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Vcpip1Q8CDG3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Vcpip1Q8CDG3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Vcpip1Q8CDG3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vcpip1Q8CDG3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms