Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC22.09■■□□□ 1.13
Rtp1Q8C8C1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Rtp1Q8C8C1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Rtp1Q8C8C1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Rtp1Q8C8C1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rtp1Q8C8C1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rtp1Q8C8C1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rtp1Q8C8C1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Rtp1Q8C8C1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC22.08■■□□□ 1.13
Rtp1Q8C8C1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Rtp1Q8C8C1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Rtp1Q8C8C1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Rtp1Q8C8C1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Rtp1Q8C8C1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rtp1Q8C8C1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rtp1Q8C8C1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rtp1Q8C8C1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rtp1Q8C8C1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Rtp1Q8C8C1 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC22.06■■□□□ 1.12
Rtp1Q8C8C1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC22.06■■□□□ 1.12
Rtp1Q8C8C1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC22.06■■□□□ 1.12
Rtp1Q8C8C1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rtp1Q8C8C1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC22.06■■□□□ 1.12
Rtp1Q8C8C1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Rtp1Q8C8C1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rtp1Q8C8C1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rtp1Q8C8C1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Rtp1Q8C8C1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rtp1Q8C8C1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Rtp1Q8C8C1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rtp1Q8C8C1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Rtp1Q8C8C1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rtp1Q8C8C1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
Rtp1Q8C8C1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC22.05■■□□□ 1.12
Rtp1Q8C8C1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.05■■□□□ 1.12
Rtp1Q8C8C1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Rtp1Q8C8C1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rtp1Q8C8C1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rtp1Q8C8C1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rtp1Q8C8C1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rtp1Q8C8C1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Rtp1Q8C8C1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rtp1Q8C8C1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rtp1Q8C8C1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rtp1Q8C8C1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.04■■□□□ 1.12
Rtp1Q8C8C1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rtp1Q8C8C1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
Rtp1Q8C8C1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.04■■□□□ 1.12
Rtp1Q8C8C1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rtp1Q8C8C1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rtp1Q8C8C1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rtp1Q8C8C1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rtp1Q8C8C1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rtp1Q8C8C1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Rtp1Q8C8C1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Rtp1Q8C8C1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Rtp1Q8C8C1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
Rtp1Q8C8C1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rtp1Q8C8C1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rtp1Q8C8C1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rtp1Q8C8C1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rtp1Q8C8C1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC22.03■■□□□ 1.12
Rtp1Q8C8C1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rtp1Q8C8C1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Rtp1Q8C8C1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rtp1Q8C8C1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rtp1Q8C8C1 Gm11643-201ENSMUST00000119578 864 ntBASIC22.02■■□□□ 1.12
Rtp1Q8C8C1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rtp1Q8C8C1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Rtp1Q8C8C1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rtp1Q8C8C1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Rtp1Q8C8C1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.02■■□□□ 1.11
Rtp1Q8C8C1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.01■■□□□ 1.11
Rtp1Q8C8C1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rtp1Q8C8C1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Rtp1Q8C8C1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rtp1Q8C8C1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rtp1Q8C8C1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rtp1Q8C8C1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC22.01■■□□□ 1.11
Rtp1Q8C8C1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rtp1Q8C8C1 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC22.01■■□□□ 1.11
Rtp1Q8C8C1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Rtp1Q8C8C1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rtp1Q8C8C1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rtp1Q8C8C1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rtp1Q8C8C1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rtp1Q8C8C1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rtp1Q8C8C1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rtp1Q8C8C1 Gm37035-201ENSMUST00000194809 2148 ntBASIC22■■□□□ 1.11
Rtp1Q8C8C1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rtp1Q8C8C1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rtp1Q8C8C1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Rtp1Q8C8C1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC22■■□□□ 1.11
Rtp1Q8C8C1 AC154649.1-201ENSMUST00000227392 384 ntBASIC22■■□□□ 1.11
Rtp1Q8C8C1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rtp1Q8C8C1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Rtp1Q8C8C1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rtp1Q8C8C1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC22■■□□□ 1.11
Rtp1Q8C8C1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rtp1Q8C8C1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms