Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfx6Q8C7R7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Rfx6Q8C7R7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfx6Q8C7R7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Rfx6Q8C7R7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx6Q8C7R7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx6Q8C7R7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx6Q8C7R7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx6Q8C7R7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx6Q8C7R7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.47■□□□□ 0.71
Rfx6Q8C7R7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx6Q8C7R7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx6Q8C7R7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx6Q8C7R7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx6Q8C7R7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx6Q8C7R7 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.46■□□□□ 0.71
Rfx6Q8C7R7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx6Q8C7R7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rfx6Q8C7R7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx6Q8C7R7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Rfx6Q8C7R7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx6Q8C7R7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx6Q8C7R7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.46■□□□□ 0.71
Rfx6Q8C7R7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.46■□□□□ 0.71
Rfx6Q8C7R7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx6Q8C7R7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx6Q8C7R7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx6Q8C7R7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rfx6Q8C7R7 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx6Q8C7R7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx6Q8C7R7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
Rfx6Q8C7R7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx6Q8C7R7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx6Q8C7R7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.45■□□□□ 0.7
Rfx6Q8C7R7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.45■□□□□ 0.7
Rfx6Q8C7R7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx6Q8C7R7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.45■□□□□ 0.7
Rfx6Q8C7R7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx6Q8C7R7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx6Q8C7R7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rfx6Q8C7R7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx6Q8C7R7 Gm14117-201ENSMUST00000122417 843 ntBASIC19.44■□□□□ 0.7
Rfx6Q8C7R7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx6Q8C7R7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.44■□□□□ 0.7
Rfx6Q8C7R7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx6Q8C7R7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rfx6Q8C7R7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx6Q8C7R7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx6Q8C7R7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx6Q8C7R7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.43■□□□□ 0.7
Rfx6Q8C7R7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx6Q8C7R7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx6Q8C7R7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
Rfx6Q8C7R7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.43■□□□□ 0.7
Rfx6Q8C7R7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
Rfx6Q8C7R7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Rfx6Q8C7R7 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.43■□□□□ 0.7
Rfx6Q8C7R7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx6Q8C7R7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx6Q8C7R7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx6Q8C7R7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx6Q8C7R7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx6Q8C7R7 Gm45102-201ENSMUST00000207427 857 ntBASIC19.42■□□□□ 0.7
Rfx6Q8C7R7 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.42■□□□□ 0.7
Rfx6Q8C7R7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx6Q8C7R7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx6Q8C7R7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx6Q8C7R7 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx6Q8C7R7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Rfx6Q8C7R7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx6Q8C7R7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx6Q8C7R7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx6Q8C7R7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx6Q8C7R7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx6Q8C7R7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rfx6Q8C7R7 Rps24-207ENSMUST00000224568 714 ntBASIC19.41■□□□□ 0.7
Rfx6Q8C7R7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx6Q8C7R7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx6Q8C7R7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
Rfx6Q8C7R7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Rfx6Q8C7R7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx6Q8C7R7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx6Q8C7R7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx6Q8C7R7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Rfx6Q8C7R7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx6Q8C7R7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx6Q8C7R7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx6Q8C7R7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx6Q8C7R7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.4■□□□□ 0.7
Rfx6Q8C7R7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx6Q8C7R7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.4■□□□□ 0.7
Rfx6Q8C7R7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx6Q8C7R7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx6Q8C7R7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Rfx6Q8C7R7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Rfx6Q8C7R7 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rfx6Q8C7R7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rfx6Q8C7R7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.39■□□□□ 0.7
Rfx6Q8C7R7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rfx6Q8C7R7 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms