Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col6a6Q8C6K9 Rab3c-203ENSMUST00000224180 967 ntBASIC17.38■□□□□ 0.37
Col6a6Q8C6K9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col6a6Q8C6K9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col6a6Q8C6K9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col6a6Q8C6K9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col6a6Q8C6K9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col6a6Q8C6K9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col6a6Q8C6K9 Gm13836-201ENSMUST00000121159 501 ntBASIC17.38■□□□□ 0.37
Col6a6Q8C6K9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Col6a6Q8C6K9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col6a6Q8C6K9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col6a6Q8C6K9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col6a6Q8C6K9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Col6a6Q8C6K9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col6a6Q8C6K9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col6a6Q8C6K9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.37■□□□□ 0.37
Col6a6Q8C6K9 Gm6576-201ENSMUST00000169678 883 ntBASIC17.37■□□□□ 0.37
Col6a6Q8C6K9 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.37■□□□□ 0.37
Col6a6Q8C6K9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col6a6Q8C6K9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Col6a6Q8C6K9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col6a6Q8C6K9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Col6a6Q8C6K9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col6a6Q8C6K9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col6a6Q8C6K9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col6a6Q8C6K9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col6a6Q8C6K9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col6a6Q8C6K9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col6a6Q8C6K9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col6a6Q8C6K9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col6a6Q8C6K9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col6a6Q8C6K9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Col6a6Q8C6K9 AA386476-201ENSMUST00000098781 1665 ntBASIC17.36■□□□□ 0.37
Col6a6Q8C6K9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col6a6Q8C6K9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col6a6Q8C6K9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Col6a6Q8C6K9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.35■□□□□ 0.37
Col6a6Q8C6K9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col6a6Q8C6K9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col6a6Q8C6K9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col6a6Q8C6K9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Col6a6Q8C6K9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col6a6Q8C6K9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Col6a6Q8C6K9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Col6a6Q8C6K9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.35■□□□□ 0.37
Col6a6Q8C6K9 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Col6a6Q8C6K9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col6a6Q8C6K9 Gm15565-201ENSMUST00000118890 427 ntBASIC17.35■□□□□ 0.37
Col6a6Q8C6K9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a6Q8C6K9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a6Q8C6K9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a6Q8C6K9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a6Q8C6K9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a6Q8C6K9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.34■□□□□ 0.37
Col6a6Q8C6K9 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.34■□□□□ 0.37
Col6a6Q8C6K9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col6a6Q8C6K9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.33■□□□□ 0.37
Col6a6Q8C6K9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.33■□□□□ 0.37
Col6a6Q8C6K9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col6a6Q8C6K9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col6a6Q8C6K9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Col6a6Q8C6K9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col6a6Q8C6K9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.33■□□□□ 0.36
Col6a6Q8C6K9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.33■□□□□ 0.36
Col6a6Q8C6K9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Col6a6Q8C6K9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col6a6Q8C6K9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Col6a6Q8C6K9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.33■□□□□ 0.36
Col6a6Q8C6K9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col6a6Q8C6K9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a6Q8C6K9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.32■□□□□ 0.36
Col6a6Q8C6K9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a6Q8C6K9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Col6a6Q8C6K9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a6Q8C6K9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a6Q8C6K9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a6Q8C6K9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a6Q8C6K9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a6Q8C6K9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a6Q8C6K9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Col6a6Q8C6K9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.32■□□□□ 0.36
Col6a6Q8C6K9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a6Q8C6K9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Col6a6Q8C6K9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a6Q8C6K9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a6Q8C6K9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a6Q8C6K9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col6a6Q8C6K9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a6Q8C6K9 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a6Q8C6K9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a6Q8C6K9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Col6a6Q8C6K9 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a6Q8C6K9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Col6a6Q8C6K9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a6Q8C6K9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a6Q8C6K9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a6Q8C6K9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a6Q8C6K9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col6a6Q8C6K9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms