Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sh3rf3Q8C120 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3rf3Q8C120 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3rf3Q8C120 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.98■□□□□ 0.79
Sh3rf3Q8C120 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Sh3rf3Q8C120 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3rf3Q8C120 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.98■□□□□ 0.79
Sh3rf3Q8C120 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3rf3Q8C120 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3rf3Q8C120 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3rf3Q8C120 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sh3rf3Q8C120 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3rf3Q8C120 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Sh3rf3Q8C120 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3rf3Q8C120 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3rf3Q8C120 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Sh3rf3Q8C120 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3rf3Q8C120 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Sh3rf3Q8C120 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3rf3Q8C120 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Sh3rf3Q8C120 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Sh3rf3Q8C120 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3rf3Q8C120 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Sh3rf3Q8C120 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3rf3Q8C120 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3rf3Q8C120 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.97■□□□□ 0.79
Sh3rf3Q8C120 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3rf3Q8C120 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Sh3rf3Q8C120 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sh3rf3Q8C120 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3rf3Q8C120 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3rf3Q8C120 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3rf3Q8C120 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Sh3rf3Q8C120 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Sh3rf3Q8C120 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Sh3rf3Q8C120 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3rf3Q8C120 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.96■□□□□ 0.79
Sh3rf3Q8C120 Gm11421-201ENSMUST00000122124 294 ntBASIC19.96■□□□□ 0.79
Sh3rf3Q8C120 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3rf3Q8C120 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3rf3Q8C120 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sh3rf3Q8C120 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3rf3Q8C120 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3rf3Q8C120 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3rf3Q8C120 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3rf3Q8C120 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3rf3Q8C120 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3rf3Q8C120 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.95■□□□□ 0.78
Sh3rf3Q8C120 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Sh3rf3Q8C120 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3rf3Q8C120 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sh3rf3Q8C120 Golph3-205ENSMUST00000228671 2842 ntBASIC19.94■□□□□ 0.78
Sh3rf3Q8C120 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3rf3Q8C120 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3rf3Q8C120 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3rf3Q8C120 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3rf3Q8C120 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.94■□□□□ 0.78
Sh3rf3Q8C120 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3rf3Q8C120 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3rf3Q8C120 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3rf3Q8C120 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Sh3rf3Q8C120 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
Sh3rf3Q8C120 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3rf3Q8C120 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3rf3Q8C120 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sh3rf3Q8C120 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3rf3Q8C120 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3rf3Q8C120 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Sh3rf3Q8C120 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3rf3Q8C120 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3rf3Q8C120 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.93■□□□□ 0.78
Sh3rf3Q8C120 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.93■□□□□ 0.78
Sh3rf3Q8C120 Gm26833-201ENSMUST00000180899 440 ntBASIC19.93■□□□□ 0.78
Sh3rf3Q8C120 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Sh3rf3Q8C120 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Sh3rf3Q8C120 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3rf3Q8C120 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.93■□□□□ 0.78
Sh3rf3Q8C120 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3rf3Q8C120 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sh3rf3Q8C120 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3rf3Q8C120 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.92■□□□□ 0.78
Sh3rf3Q8C120 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3rf3Q8C120 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.92■□□□□ 0.78
Sh3rf3Q8C120 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.92■□□□□ 0.78
Sh3rf3Q8C120 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3rf3Q8C120 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Sh3rf3Q8C120 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3rf3Q8C120 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sh3rf3Q8C120 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Sh3rf3Q8C120 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3rf3Q8C120 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3rf3Q8C120 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3rf3Q8C120 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3rf3Q8C120 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3rf3Q8C120 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Sh3rf3Q8C120 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3rf3Q8C120 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3rf3Q8C120 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.91■□□□□ 0.78
Sh3rf3Q8C120 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sh3rf3Q8C120 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms