Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd9Q8BYH8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd9Q8BYH8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd9Q8BYH8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chd9Q8BYH8 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chd9Q8BYH8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd9Q8BYH8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chd9Q8BYH8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd9Q8BYH8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd9Q8BYH8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd9Q8BYH8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd9Q8BYH8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd9Q8BYH8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.29■□□□□ 0.04
Chd9Q8BYH8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd9Q8BYH8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Chd9Q8BYH8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd9Q8BYH8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd9Q8BYH8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd9Q8BYH8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd9Q8BYH8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chd9Q8BYH8 Gm5417-201ENSMUST00000079706 384 ntBASIC15.29■□□□□ 0.04
Chd9Q8BYH8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd9Q8BYH8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.29■□□□□ 0.04
Chd9Q8BYH8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd9Q8BYH8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.28■□□□□ 0.04
Chd9Q8BYH8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chd9Q8BYH8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
Chd9Q8BYH8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd9Q8BYH8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd9Q8BYH8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chd9Q8BYH8 Dio3-201ENSMUST00000097228 1449 ntBASIC15.28■□□□□ 0.04
Chd9Q8BYH8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd9Q8BYH8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC15.28■□□□□ 0.04
Chd9Q8BYH8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd9Q8BYH8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.28■□□□□ 0.04
Chd9Q8BYH8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Chd9Q8BYH8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd9Q8BYH8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Chd9Q8BYH8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd9Q8BYH8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd9Q8BYH8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chd9Q8BYH8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chd9Q8BYH8 Gm15378-201ENSMUST00000121894 207 ntBASIC15.27■□□□□ 0.04
Chd9Q8BYH8 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chd9Q8BYH8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chd9Q8BYH8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.27■□□□□ 0.03
Chd9Q8BYH8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chd9Q8BYH8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chd9Q8BYH8 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Chd9Q8BYH8 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.26■□□□□ 0.03
Chd9Q8BYH8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Chd9Q8BYH8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Chd9Q8BYH8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.26■□□□□ 0.03
Chd9Q8BYH8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.26■□□□□ 0.03
Chd9Q8BYH8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Chd9Q8BYH8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd9Q8BYH8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd9Q8BYH8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.26■□□□□ 0.03
Chd9Q8BYH8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd9Q8BYH8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd9Q8BYH8 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.26■□□□□ 0.03
Chd9Q8BYH8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd9Q8BYH8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd9Q8BYH8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd9Q8BYH8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd9Q8BYH8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chd9Q8BYH8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.26■□□□□ 0.03
Chd9Q8BYH8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd9Q8BYH8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd9Q8BYH8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd9Q8BYH8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd9Q8BYH8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd9Q8BYH8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chd9Q8BYH8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chd9Q8BYH8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.25■□□□□ 0.03
Chd9Q8BYH8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd9Q8BYH8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd9Q8BYH8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chd9Q8BYH8 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.25■□□□□ 0.03
Chd9Q8BYH8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chd9Q8BYH8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chd9Q8BYH8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd9Q8BYH8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd9Q8BYH8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd9Q8BYH8 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chd9Q8BYH8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd9Q8BYH8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd9Q8BYH8 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd9Q8BYH8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.24■□□□□ 0.03
Chd9Q8BYH8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd9Q8BYH8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd9Q8BYH8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chd9Q8BYH8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd9Q8BYH8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd9Q8BYH8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd9Q8BYH8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chd9Q8BYH8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chd9Q8BYH8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.23■□□□□ 0.03
Chd9Q8BYH8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.23■□□□□ 0.03
Chd9Q8BYH8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms