Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trank1Q8BV79 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trank1Q8BV79 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trank1Q8BV79 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trank1Q8BV79 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.78■□□□□ 0.28
Trank1Q8BV79 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trank1Q8BV79 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Trank1Q8BV79 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trank1Q8BV79 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trank1Q8BV79 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Trank1Q8BV79 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.78■□□□□ 0.28
Trank1Q8BV79 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.78■□□□□ 0.28
Trank1Q8BV79 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.78■□□□□ 0.28
Trank1Q8BV79 Gm2559-201ENSMUST00000201323 363 ntBASIC16.78■□□□□ 0.28
Trank1Q8BV79 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trank1Q8BV79 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trank1Q8BV79 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trank1Q8BV79 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.77■□□□□ 0.28
Trank1Q8BV79 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trank1Q8BV79 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.77■□□□□ 0.28
Trank1Q8BV79 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.77■□□□□ 0.28
Trank1Q8BV79 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trank1Q8BV79 Mir1199-201ENSMUST00000117015 119 ntBASIC16.77■□□□□ 0.28
Trank1Q8BV79 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trank1Q8BV79 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trank1Q8BV79 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trank1Q8BV79 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Trank1Q8BV79 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.77■□□□□ 0.27
Trank1Q8BV79 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trank1Q8BV79 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trank1Q8BV79 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.76■□□□□ 0.27
Trank1Q8BV79 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trank1Q8BV79 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trank1Q8BV79 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trank1Q8BV79 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trank1Q8BV79 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trank1Q8BV79 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trank1Q8BV79 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trank1Q8BV79 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trank1Q8BV79 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trank1Q8BV79 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trank1Q8BV79 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.76■□□□□ 0.27
Trank1Q8BV79 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trank1Q8BV79 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trank1Q8BV79 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Trank1Q8BV79 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trank1Q8BV79 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trank1Q8BV79 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trank1Q8BV79 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trank1Q8BV79 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.75■□□□□ 0.27
Trank1Q8BV79 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trank1Q8BV79 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trank1Q8BV79 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trank1Q8BV79 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trank1Q8BV79 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.75■□□□□ 0.27
Trank1Q8BV79 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.75■□□□□ 0.27
Trank1Q8BV79 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trank1Q8BV79 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trank1Q8BV79 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trank1Q8BV79 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trank1Q8BV79 Gm11643-201ENSMUST00000119578 864 ntBASIC16.74■□□□□ 0.27
Trank1Q8BV79 Mir5122-201ENSMUST00000175004 89 ntBASIC16.74■□□□□ 0.27
Trank1Q8BV79 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trank1Q8BV79 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trank1Q8BV79 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.74■□□□□ 0.27
Trank1Q8BV79 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trank1Q8BV79 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trank1Q8BV79 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trank1Q8BV79 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trank1Q8BV79 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trank1Q8BV79 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trank1Q8BV79 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trank1Q8BV79 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.74■□□□□ 0.27
Trank1Q8BV79 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trank1Q8BV79 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trank1Q8BV79 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trank1Q8BV79 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trank1Q8BV79 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trank1Q8BV79 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trank1Q8BV79 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trank1Q8BV79 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trank1Q8BV79 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trank1Q8BV79 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trank1Q8BV79 Gm11249-201ENSMUST00000117071 859 ntBASIC16.73■□□□□ 0.27
Trank1Q8BV79 Gm6433-201ENSMUST00000118634 875 ntBASIC16.73■□□□□ 0.27
Trank1Q8BV79 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.73■□□□□ 0.27
Trank1Q8BV79 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trank1Q8BV79 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trank1Q8BV79 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trank1Q8BV79 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trank1Q8BV79 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trank1Q8BV79 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trank1Q8BV79 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trank1Q8BV79 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.72■□□□□ 0.27
Trank1Q8BV79 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trank1Q8BV79 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trank1Q8BV79 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trank1Q8BV79 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trank1Q8BV79 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.71■□□□□ 0.27
Trank1Q8BV79 Gm10698-201ENSMUST00000182663 604 ntBASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms