Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
VmacQ8BP01 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VmacQ8BP01 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
VmacQ8BP01 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.18■■□□□ 1.14
VmacQ8BP01 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.18■■□□□ 1.14
VmacQ8BP01 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
VmacQ8BP01 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
VmacQ8BP01 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
VmacQ8BP01 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
VmacQ8BP01 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
VmacQ8BP01 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VmacQ8BP01 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VmacQ8BP01 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
VmacQ8BP01 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VmacQ8BP01 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
VmacQ8BP01 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
VmacQ8BP01 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
VmacQ8BP01 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
VmacQ8BP01 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VmacQ8BP01 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.16■■□□□ 1.14
VmacQ8BP01 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.16■■□□□ 1.14
VmacQ8BP01 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VmacQ8BP01 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
VmacQ8BP01 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
VmacQ8BP01 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VmacQ8BP01 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
VmacQ8BP01 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VmacQ8BP01 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.15■■□□□ 1.14
VmacQ8BP01 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
VmacQ8BP01 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
VmacQ8BP01 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
VmacQ8BP01 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
VmacQ8BP01 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
VmacQ8BP01 Gm5540-201ENSMUST00000131852 1848 ntBASIC22.15■■□□□ 1.14
VmacQ8BP01 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.15■■□□□ 1.14
VmacQ8BP01 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
VmacQ8BP01 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
VmacQ8BP01 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
VmacQ8BP01 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
VmacQ8BP01 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
VmacQ8BP01 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
VmacQ8BP01 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
VmacQ8BP01 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
VmacQ8BP01 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
VmacQ8BP01 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
VmacQ8BP01 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.13■■□□□ 1.13
VmacQ8BP01 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VmacQ8BP01 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.13■■□□□ 1.13
VmacQ8BP01 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VmacQ8BP01 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
VmacQ8BP01 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
VmacQ8BP01 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VmacQ8BP01 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
VmacQ8BP01 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
VmacQ8BP01 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
VmacQ8BP01 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
VmacQ8BP01 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC22.12■■□□□ 1.13
VmacQ8BP01 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
VmacQ8BP01 Gm10616-201ENSMUST00000205285 2127 ntBASIC22.12■■□□□ 1.13
VmacQ8BP01 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VmacQ8BP01 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
VmacQ8BP01 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
VmacQ8BP01 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
VmacQ8BP01 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
VmacQ8BP01 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
VmacQ8BP01 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
VmacQ8BP01 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VmacQ8BP01 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
VmacQ8BP01 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
VmacQ8BP01 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC22.1■■□□□ 1.13
VmacQ8BP01 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VmacQ8BP01 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VmacQ8BP01 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC22.1■■□□□ 1.13
VmacQ8BP01 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
VmacQ8BP01 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VmacQ8BP01 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
VmacQ8BP01 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
VmacQ8BP01 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.1■■□□□ 1.13
VmacQ8BP01 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
VmacQ8BP01 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
VmacQ8BP01 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
VmacQ8BP01 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC22.09■■□□□ 1.13
VmacQ8BP01 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VmacQ8BP01 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VmacQ8BP01 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
VmacQ8BP01 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VmacQ8BP01 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
VmacQ8BP01 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VmacQ8BP01 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
VmacQ8BP01 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VmacQ8BP01 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
VmacQ8BP01 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.09■■□□□ 1.13
VmacQ8BP01 Gm27032-201ENSMUST00000183124 1116 ntBASIC22.09■■□□□ 1.13
VmacQ8BP01 Gm38205-201ENSMUST00000192243 258 ntBASIC22.09■■□□□ 1.13
VmacQ8BP01 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22.09■■□□□ 1.13
VmacQ8BP01 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
VmacQ8BP01 Gm10493-201ENSMUST00000097270 612 ntBASIC22.09■■□□□ 1.13
VmacQ8BP01 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VmacQ8BP01 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
VmacQ8BP01 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms