Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp2bQ8BJF9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Chmp2bQ8BJF9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp2bQ8BJF9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
Chmp2bQ8BJF9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp2bQ8BJF9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Chmp2bQ8BJF9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.58■□□□□ 0.73
Chmp2bQ8BJF9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.58■□□□□ 0.73
Chmp2bQ8BJF9 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.58■□□□□ 0.72
Chmp2bQ8BJF9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp2bQ8BJF9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp2bQ8BJF9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp2bQ8BJF9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Chmp2bQ8BJF9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp2bQ8BJF9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp2bQ8BJF9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp2bQ8BJF9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.57■□□□□ 0.72
Chmp2bQ8BJF9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp2bQ8BJF9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp2bQ8BJF9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp2bQ8BJF9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp2bQ8BJF9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Chmp2bQ8BJF9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Chmp2bQ8BJF9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.57■□□□□ 0.72
Chmp2bQ8BJF9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp2bQ8BJF9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp2bQ8BJF9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp2bQ8BJF9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp2bQ8BJF9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Chmp2bQ8BJF9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Chmp2bQ8BJF9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Chmp2bQ8BJF9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.56■□□□□ 0.72
Chmp2bQ8BJF9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp2bQ8BJF9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp2bQ8BJF9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.56■□□□□ 0.72
Chmp2bQ8BJF9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp2bQ8BJF9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp2bQ8BJF9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp2bQ8BJF9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.55■□□□□ 0.72
Chmp2bQ8BJF9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.55■□□□□ 0.72
Chmp2bQ8BJF9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.55■□□□□ 0.72
Chmp2bQ8BJF9 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.55■□□□□ 0.72
Chmp2bQ8BJF9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp2bQ8BJF9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp2bQ8BJF9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Chmp2bQ8BJF9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp2bQ8BJF9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.55■□□□□ 0.72
Chmp2bQ8BJF9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp2bQ8BJF9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp2bQ8BJF9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp2bQ8BJF9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp2bQ8BJF9 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.54■□□□□ 0.72
Chmp2bQ8BJF9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp2bQ8BJF9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Chmp2bQ8BJF9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Chmp2bQ8BJF9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
Chmp2bQ8BJF9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
Chmp2bQ8BJF9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp2bQ8BJF9 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.54■□□□□ 0.72
Chmp2bQ8BJF9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp2bQ8BJF9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp2bQ8BJF9 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp2bQ8BJF9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Chmp2bQ8BJF9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Chmp2bQ8BJF9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp2bQ8BJF9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Chmp2bQ8BJF9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp2bQ8BJF9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp2bQ8BJF9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp2bQ8BJF9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Chmp2bQ8BJF9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp2bQ8BJF9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp2bQ8BJF9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Chmp2bQ8BJF9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.53■□□□□ 0.72
Chmp2bQ8BJF9 Golgb1-201ENSMUST00000023534 498 ntBASIC19.53■□□□□ 0.72
Chmp2bQ8BJF9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Chmp2bQ8BJF9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp2bQ8BJF9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2bQ8BJF9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2bQ8BJF9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Chmp2bQ8BJF9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2bQ8BJF9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2bQ8BJF9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Chmp2bQ8BJF9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2bQ8BJF9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2bQ8BJF9 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.52■□□□□ 0.72
Chmp2bQ8BJF9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2bQ8BJF9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.52■□□□□ 0.72
Chmp2bQ8BJF9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2bQ8BJF9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2bQ8BJF9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Chmp2bQ8BJF9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp2bQ8BJF9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp2bQ8BJF9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp2bQ8BJF9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp2bQ8BJF9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp2bQ8BJF9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp2bQ8BJF9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp2bQ8BJF9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp2bQ8BJF9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms