Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh20Q8BIZ0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdh20Q8BIZ0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh20Q8BIZ0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh20Q8BIZ0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh20Q8BIZ0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh20Q8BIZ0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.66■□□□□ 0.58
Pcdh20Q8BIZ0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdh20Q8BIZ0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.66■□□□□ 0.58
Pcdh20Q8BIZ0 Gm8493-201ENSMUST00000196881 489 ntBASIC18.66■□□□□ 0.58
Pcdh20Q8BIZ0 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.66■□□□□ 0.58
Pcdh20Q8BIZ0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh20Q8BIZ0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh20Q8BIZ0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh20Q8BIZ0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.65■□□□□ 0.58
Pcdh20Q8BIZ0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdh20Q8BIZ0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh20Q8BIZ0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdh20Q8BIZ0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh20Q8BIZ0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdh20Q8BIZ0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdh20Q8BIZ0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdh20Q8BIZ0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Pcdh20Q8BIZ0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh20Q8BIZ0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdh20Q8BIZ0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdh20Q8BIZ0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh20Q8BIZ0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh20Q8BIZ0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh20Q8BIZ0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh20Q8BIZ0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh20Q8BIZ0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh20Q8BIZ0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdh20Q8BIZ0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh20Q8BIZ0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh20Q8BIZ0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdh20Q8BIZ0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh20Q8BIZ0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh20Q8BIZ0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.63■□□□□ 0.57
Pcdh20Q8BIZ0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh20Q8BIZ0 Mir6236-201ENSMUST00000184437 123 ntBASIC18.63■□□□□ 0.57
Pcdh20Q8BIZ0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh20Q8BIZ0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh20Q8BIZ0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdh20Q8BIZ0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdh20Q8BIZ0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh20Q8BIZ0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh20Q8BIZ0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh20Q8BIZ0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh20Q8BIZ0 Spcs1-204ENSMUST00000226782 949 ntBASIC18.62■□□□□ 0.57
Pcdh20Q8BIZ0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh20Q8BIZ0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdh20Q8BIZ0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh20Q8BIZ0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh20Q8BIZ0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh20Q8BIZ0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh20Q8BIZ0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh20Q8BIZ0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh20Q8BIZ0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Pcdh20Q8BIZ0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh20Q8BIZ0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh20Q8BIZ0 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.61■□□□□ 0.57
Pcdh20Q8BIZ0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcdh20Q8BIZ0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh20Q8BIZ0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh20Q8BIZ0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh20Q8BIZ0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh20Q8BIZ0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pcdh20Q8BIZ0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdh20Q8BIZ0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh20Q8BIZ0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh20Q8BIZ0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh20Q8BIZ0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh20Q8BIZ0 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.6■□□□□ 0.57
Pcdh20Q8BIZ0 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.6■□□□□ 0.57
Pcdh20Q8BIZ0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh20Q8BIZ0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh20Q8BIZ0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh20Q8BIZ0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh20Q8BIZ0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh20Q8BIZ0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.6■□□□□ 0.57
Pcdh20Q8BIZ0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh20Q8BIZ0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh20Q8BIZ0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh20Q8BIZ0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.6■□□□□ 0.57
Pcdh20Q8BIZ0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh20Q8BIZ0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh20Q8BIZ0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Pcdh20Q8BIZ0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh20Q8BIZ0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh20Q8BIZ0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdh20Q8BIZ0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh20Q8BIZ0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh20Q8BIZ0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcdh20Q8BIZ0 Gm12251-201ENSMUST00000117893 792 ntBASIC18.59■□□□□ 0.57
Pcdh20Q8BIZ0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh20Q8BIZ0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.59■□□□□ 0.57
Pcdh20Q8BIZ0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh20Q8BIZ0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Pcdh20Q8BIZ0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms