Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox21Q811W0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.69■□□□□ 0.1
Sox21Q811W0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox21Q811W0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox21Q811W0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox21Q811W0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox21Q811W0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Sox21Q811W0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox21Q811W0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox21Q811W0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox21Q811W0 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.68■□□□□ 0.1
Sox21Q811W0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox21Q811W0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox21Q811W0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sox21Q811W0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC15.68■□□□□ 0.1
Sox21Q811W0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox21Q811W0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.68■□□□□ 0.1
Sox21Q811W0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox21Q811W0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox21Q811W0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox21Q811W0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sox21Q811W0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox21Q811W0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sox21Q811W0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sox21Q811W0 Gm14281-201ENSMUST00000121700 1294 ntBASIC15.67■□□□□ 0.1
Sox21Q811W0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sox21Q811W0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sox21Q811W0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox21Q811W0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sox21Q811W0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox21Q811W0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox21Q811W0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox21Q811W0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sox21Q811W0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sox21Q811W0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox21Q811W0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox21Q811W0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox21Q811W0 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.66■□□□□ 0.1
Sox21Q811W0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Sox21Q811W0 Gm13234-201ENSMUST00000120010 747 ntBASIC15.66■□□□□ 0.1
Sox21Q811W0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox21Q811W0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.66■□□□□ 0.1
Sox21Q811W0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox21Q811W0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox21Q811W0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox21Q811W0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.66■□□□□ 0.1
Sox21Q811W0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox21Q811W0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox21Q811W0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox21Q811W0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox21Q811W0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox21Q811W0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox21Q811W0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox21Q811W0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.65■□□□□ 0.1
Sox21Q811W0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.65■□□□□ 0.1
Sox21Q811W0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.65■□□□□ 0.1
Sox21Q811W0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.65■□□□□ 0.1
Sox21Q811W0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox21Q811W0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox21Q811W0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Sox21Q811W0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox21Q811W0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox21Q811W0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox21Q811W0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox21Q811W0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox21Q811W0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Sox21Q811W0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox21Q811W0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox21Q811W0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox21Q811W0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox21Q811W0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Sox21Q811W0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox21Q811W0 Gm27801-201ENSMUST00000184174 223 ntBASIC15.64■□□□□ 0.09
Sox21Q811W0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox21Q811W0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox21Q811W0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox21Q811W0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox21Q811W0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Sox21Q811W0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox21Q811W0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox21Q811W0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Sox21Q811W0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Sox21Q811W0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox21Q811W0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox21Q811W0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox21Q811W0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox21Q811W0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox21Q811W0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox21Q811W0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox21Q811W0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.63■□□□□ 0.09
Sox21Q811W0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.63■□□□□ 0.09
Sox21Q811W0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox21Q811W0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox21Q811W0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox21Q811W0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox21Q811W0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox21Q811W0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox21Q811W0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
Sox21Q811W0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Sox21Q811W0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms