Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Upk3bQ80YF6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Upk3bQ80YF6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Upk3bQ80YF6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Upk3bQ80YF6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Upk3bQ80YF6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Upk3bQ80YF6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Upk3bQ80YF6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Upk3bQ80YF6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Upk3bQ80YF6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Upk3bQ80YF6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Upk3bQ80YF6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Upk3bQ80YF6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Upk3bQ80YF6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Upk3bQ80YF6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Upk3bQ80YF6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Upk3bQ80YF6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Upk3bQ80YF6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Upk3bQ80YF6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Upk3bQ80YF6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Upk3bQ80YF6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Upk3bQ80YF6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Upk3bQ80YF6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Upk3bQ80YF6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Upk3bQ80YF6 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.22■□□□□ 0.19
Upk3bQ80YF6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Upk3bQ80YF6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Upk3bQ80YF6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Upk3bQ80YF6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Upk3bQ80YF6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Upk3bQ80YF6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Upk3bQ80YF6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Upk3bQ80YF6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Upk3bQ80YF6 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.22■□□□□ 0.19
Upk3bQ80YF6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Upk3bQ80YF6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Upk3bQ80YF6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Upk3bQ80YF6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.22■□□□□ 0.19
Upk3bQ80YF6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Upk3bQ80YF6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Upk3bQ80YF6 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Upk3bQ80YF6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk3bQ80YF6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk3bQ80YF6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk3bQ80YF6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk3bQ80YF6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk3bQ80YF6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk3bQ80YF6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk3bQ80YF6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk3bQ80YF6 Gm15820-201ENSMUST00000201566 728 ntBASIC16.21■□□□□ 0.19
Upk3bQ80YF6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Upk3bQ80YF6 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk3bQ80YF6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk3bQ80YF6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Upk3bQ80YF6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Upk3bQ80YF6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Upk3bQ80YF6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Upk3bQ80YF6 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Upk3bQ80YF6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Upk3bQ80YF6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Upk3bQ80YF6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Upk3bQ80YF6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Upk3bQ80YF6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.2■□□□□ 0.18
Upk3bQ80YF6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Upk3bQ80YF6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Upk3bQ80YF6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Upk3bQ80YF6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Upk3bQ80YF6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Upk3bQ80YF6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Upk3bQ80YF6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Upk3bQ80YF6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Upk3bQ80YF6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk3bQ80YF6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Upk3bQ80YF6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Upk3bQ80YF6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk3bQ80YF6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Upk3bQ80YF6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk3bQ80YF6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk3bQ80YF6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Upk3bQ80YF6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.19■□□□□ 0.18
Upk3bQ80YF6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.19■□□□□ 0.18
Upk3bQ80YF6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Upk3bQ80YF6 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.19■□□□□ 0.18
Upk3bQ80YF6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk3bQ80YF6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk3bQ80YF6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Upk3bQ80YF6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk3bQ80YF6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.19■□□□□ 0.18
Upk3bQ80YF6 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Upk3bQ80YF6 BC021767-201ENSMUST00000126387 1716 ntBASIC16.19■□□□□ 0.18
Upk3bQ80YF6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.19■□□□□ 0.18
Upk3bQ80YF6 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Upk3bQ80YF6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Upk3bQ80YF6 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.18■□□□□ 0.18
Upk3bQ80YF6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Upk3bQ80YF6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
Upk3bQ80YF6 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Upk3bQ80YF6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Upk3bQ80YF6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Upk3bQ80YF6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms