Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Trim36Q80WG7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim36Q80WG7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim36Q80WG7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim36Q80WG7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trim36Q80WG7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim36Q80WG7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim36Q80WG7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trim36Q80WG7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim36Q80WG7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim36Q80WG7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim36Q80WG7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim36Q80WG7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim36Q80WG7 Gm43530-201ENSMUST00000195920 274 ntBASIC18.49■□□□□ 0.55
Trim36Q80WG7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim36Q80WG7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim36Q80WG7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim36Q80WG7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim36Q80WG7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Trim36Q80WG7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim36Q80WG7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim36Q80WG7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim36Q80WG7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim36Q80WG7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Trim36Q80WG7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim36Q80WG7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim36Q80WG7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim36Q80WG7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim36Q80WG7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim36Q80WG7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Trim36Q80WG7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim36Q80WG7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.47■□□□□ 0.55
Trim36Q80WG7 Gm43137-201ENSMUST00000198052 594 ntBASIC18.47■□□□□ 0.55
Trim36Q80WG7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim36Q80WG7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim36Q80WG7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.47■□□□□ 0.55
Trim36Q80WG7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim36Q80WG7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim36Q80WG7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim36Q80WG7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim36Q80WG7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim36Q80WG7 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim36Q80WG7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim36Q80WG7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim36Q80WG7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.46■□□□□ 0.55
Trim36Q80WG7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trim36Q80WG7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Trim36Q80WG7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim36Q80WG7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Trim36Q80WG7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim36Q80WG7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Trim36Q80WG7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim36Q80WG7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim36Q80WG7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim36Q80WG7 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim36Q80WG7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim36Q80WG7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim36Q80WG7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Trim36Q80WG7 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
Trim36Q80WG7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trim36Q80WG7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim36Q80WG7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Trim36Q80WG7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.45■□□□□ 0.54
Trim36Q80WG7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trim36Q80WG7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim36Q80WG7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim36Q80WG7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.44■□□□□ 0.54
Trim36Q80WG7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim36Q80WG7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Trim36Q80WG7 Gm6139-201ENSMUST00000079261 882 ntBASIC18.44■□□□□ 0.54
Trim36Q80WG7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim36Q80WG7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim36Q80WG7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim36Q80WG7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim36Q80WG7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim36Q80WG7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trim36Q80WG7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
Trim36Q80WG7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim36Q80WG7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim36Q80WG7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim36Q80WG7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim36Q80WG7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim36Q80WG7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.43■□□□□ 0.54
Trim36Q80WG7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
Trim36Q80WG7 Mir6236-201ENSMUST00000184437 123 ntBASIC18.43■□□□□ 0.54
Trim36Q80WG7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim36Q80WG7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trim36Q80WG7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim36Q80WG7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim36Q80WG7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Trim36Q80WG7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trim36Q80WG7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim36Q80WG7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Trim36Q80WG7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim36Q80WG7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trim36Q80WG7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim36Q80WG7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim36Q80WG7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Trim36Q80WG7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim36Q80WG7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms