Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.92■□□□□ 0.94
Sh3tc2Q80VA5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3tc2Q80VA5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3tc2Q80VA5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3tc2Q80VA5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3tc2Q80VA5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Sh3tc2Q80VA5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sh3tc2Q80VA5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3tc2Q80VA5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.91■□□□□ 0.94
Sh3tc2Q80VA5 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3tc2Q80VA5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3tc2Q80VA5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
Sh3tc2Q80VA5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
Sh3tc2Q80VA5 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3tc2Q80VA5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3tc2Q80VA5 Gm6365-201ENSMUST00000054711 744 ntBASIC20.91■□□□□ 0.94
Sh3tc2Q80VA5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3tc2Q80VA5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3tc2Q80VA5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3tc2Q80VA5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3tc2Q80VA5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sh3tc2Q80VA5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3tc2Q80VA5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3tc2Q80VA5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3tc2Q80VA5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3tc2Q80VA5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3tc2Q80VA5 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Sh3tc2Q80VA5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3tc2Q80VA5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3tc2Q80VA5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.9■□□□□ 0.94
Sh3tc2Q80VA5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3tc2Q80VA5 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.9■□□□□ 0.94
Sh3tc2Q80VA5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3tc2Q80VA5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sh3tc2Q80VA5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sh3tc2Q80VA5 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.94
Sh3tc2Q80VA5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sh3tc2Q80VA5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sh3tc2Q80VA5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sh3tc2Q80VA5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Sh3tc2Q80VA5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3tc2Q80VA5 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.89■□□□□ 0.93
Sh3tc2Q80VA5 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3tc2Q80VA5 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3tc2Q80VA5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3tc2Q80VA5 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sh3tc2Q80VA5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3tc2Q80VA5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3tc2Q80VA5 Gm13168-201ENSMUST00000121771 632 ntBASIC20.88■□□□□ 0.93
Sh3tc2Q80VA5 Mir7071-201ENSMUST00000184847 69 ntBASIC20.88■□□□□ 0.93
Sh3tc2Q80VA5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.88■□□□□ 0.93
Sh3tc2Q80VA5 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.88■□□□□ 0.93
Sh3tc2Q80VA5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Sh3tc2Q80VA5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.88■□□□□ 0.93
Sh3tc2Q80VA5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sh3tc2Q80VA5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Sh3tc2Q80VA5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3tc2Q80VA5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3tc2Q80VA5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3tc2Q80VA5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3tc2Q80VA5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.87■□□□□ 0.93
Sh3tc2Q80VA5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.87■□□□□ 0.93
Sh3tc2Q80VA5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Sh3tc2Q80VA5 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.87■□□□□ 0.93
Sh3tc2Q80VA5 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3tc2Q80VA5 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3tc2Q80VA5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3tc2Q80VA5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sh3tc2Q80VA5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Sh3tc2Q80VA5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3tc2Q80VA5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3tc2Q80VA5 Notumos-201ENSMUST00000151998 2659 ntBASIC20.86■□□□□ 0.93
Sh3tc2Q80VA5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3tc2Q80VA5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3tc2Q80VA5 Gm13146-201ENSMUST00000118508 780 ntBASIC20.86■□□□□ 0.93
Sh3tc2Q80VA5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.86■□□□□ 0.93
Sh3tc2Q80VA5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3tc2Q80VA5 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3tc2Q80VA5 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Sh3tc2Q80VA5 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3tc2Q80VA5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3tc2Q80VA5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Sh3tc2Q80VA5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Sh3tc2Q80VA5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sh3tc2Q80VA5 Gm7290-201ENSMUST00000104990 617 ntBASIC20.85■□□□□ 0.93
Sh3tc2Q80VA5 Gm12918-201ENSMUST00000120234 636 ntBASIC20.85■□□□□ 0.93
Sh3tc2Q80VA5 Gm15710-201ENSMUST00000121821 636 ntBASIC20.85■□□□□ 0.93
Sh3tc2Q80VA5 Gm6420-201ENSMUST00000193885 723 ntBASIC20.85■□□□□ 0.93
Sh3tc2Q80VA5 Gm5075-201ENSMUST00000196916 622 ntBASIC20.85■□□□□ 0.93
Sh3tc2Q80VA5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3tc2Q80VA5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.85■□□□□ 0.93
Sh3tc2Q80VA5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.85■□□□□ 0.93
Sh3tc2Q80VA5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.85■□□□□ 0.93
Sh3tc2Q80VA5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sh3tc2Q80VA5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Sh3tc2Q80VA5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3tc2Q80VA5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3tc2Q80VA5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3tc2Q80VA5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sh3tc2Q80VA5 Gm38205-201ENSMUST00000192243 258 ntBASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms