Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rpp38Q80UU2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpp38Q80UU2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpp38Q80UU2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpp38Q80UU2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Rpp38Q80UU2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rpp38Q80UU2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpp38Q80UU2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpp38Q80UU2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rpp38Q80UU2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Rpp38Q80UU2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpp38Q80UU2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpp38Q80UU2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpp38Q80UU2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.23■□□□□ 0.67
Rpp38Q80UU2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpp38Q80UU2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpp38Q80UU2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rpp38Q80UU2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rpp38Q80UU2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Rpp38Q80UU2 Gm7860-201ENSMUST00000121190 879 ntBASIC19.22■□□□□ 0.67
Rpp38Q80UU2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rpp38Q80UU2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.22■□□□□ 0.67
Rpp38Q80UU2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Rpp38Q80UU2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rpp38Q80UU2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rpp38Q80UU2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpp38Q80UU2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpp38Q80UU2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rpp38Q80UU2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rpp38Q80UU2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpp38Q80UU2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpp38Q80UU2 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpp38Q80UU2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rpp38Q80UU2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.21■□□□□ 0.67
Rpp38Q80UU2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
Rpp38Q80UU2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.21■□□□□ 0.67
Rpp38Q80UU2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.21■□□□□ 0.67
Rpp38Q80UU2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpp38Q80UU2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpp38Q80UU2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpp38Q80UU2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpp38Q80UU2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rpp38Q80UU2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rpp38Q80UU2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rpp38Q80UU2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.2■□□□□ 0.66
Rpp38Q80UU2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.2■□□□□ 0.66
Rpp38Q80UU2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rpp38Q80UU2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpp38Q80UU2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpp38Q80UU2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpp38Q80UU2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpp38Q80UU2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.2■□□□□ 0.66
Rpp38Q80UU2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpp38Q80UU2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Rpp38Q80UU2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpp38Q80UU2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp38Q80UU2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp38Q80UU2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Rpp38Q80UU2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.19■□□□□ 0.66
Rpp38Q80UU2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp38Q80UU2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp38Q80UU2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp38Q80UU2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rpp38Q80UU2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp38Q80UU2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpp38Q80UU2 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.18■□□□□ 0.66
Rpp38Q80UU2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp38Q80UU2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.18■□□□□ 0.66
Rpp38Q80UU2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rpp38Q80UU2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp38Q80UU2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.18■□□□□ 0.66
Rpp38Q80UU2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp38Q80UU2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp38Q80UU2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp38Q80UU2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp38Q80UU2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp38Q80UU2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpp38Q80UU2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp38Q80UU2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp38Q80UU2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.17■□□□□ 0.66
Rpp38Q80UU2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp38Q80UU2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rpp38Q80UU2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.17■□□□□ 0.66
Rpp38Q80UU2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.17■□□□□ 0.66
Rpp38Q80UU2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp38Q80UU2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp38Q80UU2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp38Q80UU2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp38Q80UU2 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.17■□□□□ 0.66
Rpp38Q80UU2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp38Q80UU2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp38Q80UU2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rpp38Q80UU2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.17■□□□□ 0.66
Rpp38Q80UU2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp38Q80UU2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpp38Q80UU2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp38Q80UU2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp38Q80UU2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp38Q80UU2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpp38Q80UU2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms