Protein–RNA interactions for Protein: Q7TND5

Rpf1, Ribosome production factor 1, mousemouse

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf1Q7TND5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.67■□□□□ 0.9
Rpf1Q7TND5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rpf1Q7TND5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.67■□□□□ 0.9
Rpf1Q7TND5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rpf1Q7TND5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.67■□□□□ 0.9
Rpf1Q7TND5 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpf1Q7TND5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rpf1Q7TND5 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpf1Q7TND5 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rpf1Q7TND5 Gm10849-201ENSMUST00000100397 618 ntBASIC20.66■□□□□ 0.9
Rpf1Q7TND5 Gm38205-201ENSMUST00000192243 258 ntBASIC20.66■□□□□ 0.9
Rpf1Q7TND5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.66■□□□□ 0.9
Rpf1Q7TND5 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.66■□□□□ 0.9
Rpf1Q7TND5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpf1Q7TND5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rpf1Q7TND5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rpf1Q7TND5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
Rpf1Q7TND5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.66■□□□□ 0.9
Rpf1Q7TND5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpf1Q7TND5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rpf1Q7TND5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rpf1Q7TND5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Rpf1Q7TND5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.65■□□□□ 0.9
Rpf1Q7TND5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpf1Q7TND5 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpf1Q7TND5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpf1Q7TND5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpf1Q7TND5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.65■□□□□ 0.9
Rpf1Q7TND5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpf1Q7TND5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpf1Q7TND5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Rpf1Q7TND5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpf1Q7TND5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpf1Q7TND5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rpf1Q7TND5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rpf1Q7TND5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rpf1Q7TND5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Rpf1Q7TND5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
Rpf1Q7TND5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpf1Q7TND5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rpf1Q7TND5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rpf1Q7TND5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpf1Q7TND5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rpf1Q7TND5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.64■□□□□ 0.89
Rpf1Q7TND5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpf1Q7TND5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rpf1Q7TND5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpf1Q7TND5 Gm7860-201ENSMUST00000121190 879 ntBASIC20.63■□□□□ 0.89
Rpf1Q7TND5 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.63■□□□□ 0.89
Rpf1Q7TND5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpf1Q7TND5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpf1Q7TND5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rpf1Q7TND5 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.63■□□□□ 0.89
Rpf1Q7TND5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpf1Q7TND5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpf1Q7TND5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rpf1Q7TND5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpf1Q7TND5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpf1Q7TND5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rpf1Q7TND5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpf1Q7TND5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.62■□□□□ 0.89
Rpf1Q7TND5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.62■□□□□ 0.89
Rpf1Q7TND5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpf1Q7TND5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rpf1Q7TND5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpf1Q7TND5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rpf1Q7TND5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpf1Q7TND5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpf1Q7TND5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpf1Q7TND5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.61■□□□□ 0.89
Rpf1Q7TND5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rpf1Q7TND5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpf1Q7TND5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpf1Q7TND5 Gm27405-201ENSMUST00000184201 112 ntBASIC20.61■□□□□ 0.89
Rpf1Q7TND5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpf1Q7TND5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpf1Q7TND5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpf1Q7TND5 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpf1Q7TND5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rpf1Q7TND5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpf1Q7TND5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Rpf1Q7TND5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.61■□□□□ 0.89
Rpf1Q7TND5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpf1Q7TND5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpf1Q7TND5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpf1Q7TND5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Rpf1Q7TND5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rpf1Q7TND5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.6■□□□□ 0.89
Rpf1Q7TND5 Gm7291-201ENSMUST00000199147 382 ntBASIC20.6■□□□□ 0.89
Rpf1Q7TND5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.6■□□□□ 0.89
Rpf1Q7TND5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Rpf1Q7TND5 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpf1Q7TND5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpf1Q7TND5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpf1Q7TND5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rpf1Q7TND5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpf1Q7TND5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.59■□□□□ 0.89
Rpf1Q7TND5 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.59■□□□□ 0.89
Rpf1Q7TND5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpf1Q7TND5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms