Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Scn10aQ6QIY3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Scn10aQ6QIY3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Scn10aQ6QIY3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Scn10aQ6QIY3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Scn10aQ6QIY3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
Scn10aQ6QIY3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Scn10aQ6QIY3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
Scn10aQ6QIY3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Scn10aQ6QIY3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Scn10aQ6QIY3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC22.14■■□□□ 1.13
Scn10aQ6QIY3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC22.14■■□□□ 1.13
Scn10aQ6QIY3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC22.14■■□□□ 1.13
Scn10aQ6QIY3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Scn10aQ6QIY3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Scn10aQ6QIY3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Scn10aQ6QIY3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC22.13■■□□□ 1.13
Scn10aQ6QIY3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Scn10aQ6QIY3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Scn10aQ6QIY3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Scn10aQ6QIY3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC22.12■■□□□ 1.13
Scn10aQ6QIY3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Scn10aQ6QIY3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Scn10aQ6QIY3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Scn10aQ6QIY3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Scn10aQ6QIY3 Gm26971-201ENSMUST00000182423 1072 ntBASIC22.12■■□□□ 1.13
Scn10aQ6QIY3 Gm37055-201ENSMUST00000191866 133 ntBASIC22.12■■□□□ 1.13
Scn10aQ6QIY3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Scn10aQ6QIY3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Scn10aQ6QIY3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Scn10aQ6QIY3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Scn10aQ6QIY3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Scn10aQ6QIY3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Scn10aQ6QIY3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC22.11■■□□□ 1.13
Scn10aQ6QIY3 Gm44549-201ENSMUST00000208351 577 ntBASIC22.11■■□□□ 1.13
Scn10aQ6QIY3 Arhgef33-211ENSMUST00000225658 473 ntBASIC22.11■■□□□ 1.13
Scn10aQ6QIY3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Scn10aQ6QIY3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Scn10aQ6QIY3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Scn10aQ6QIY3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Scn10aQ6QIY3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC22.1■■□□□ 1.13
Scn10aQ6QIY3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Scn10aQ6QIY3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Scn10aQ6QIY3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Scn10aQ6QIY3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Scn10aQ6QIY3 Gm15565-201ENSMUST00000118890 427 ntBASIC22.1■■□□□ 1.13
Scn10aQ6QIY3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Scn10aQ6QIY3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Scn10aQ6QIY3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Scn10aQ6QIY3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Scn10aQ6QIY3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Scn10aQ6QIY3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Scn10aQ6QIY3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC22.09■■□□□ 1.13
Scn10aQ6QIY3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Scn10aQ6QIY3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Scn10aQ6QIY3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Scn10aQ6QIY3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Scn10aQ6QIY3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC22.08■■□□□ 1.12
Scn10aQ6QIY3 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Scn10aQ6QIY3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC22.08■■□□□ 1.12
Scn10aQ6QIY3 Gm2399-201ENSMUST00000104944 225 ntBASIC22.07■■□□□ 1.12
Scn10aQ6QIY3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Scn10aQ6QIY3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
Scn10aQ6QIY3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Scn10aQ6QIY3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Scn10aQ6QIY3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Scn10aQ6QIY3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC22.07■■□□□ 1.12
Scn10aQ6QIY3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Scn10aQ6QIY3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC22.07■■□□□ 1.12
Scn10aQ6QIY3 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Scn10aQ6QIY3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC22.07■■□□□ 1.12
Scn10aQ6QIY3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
Scn10aQ6QIY3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Scn10aQ6QIY3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC22.06■■□□□ 1.12
Scn10aQ6QIY3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Scn10aQ6QIY3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Scn10aQ6QIY3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Scn10aQ6QIY3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
Scn10aQ6QIY3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Scn10aQ6QIY3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC22.05■■□□□ 1.12
Scn10aQ6QIY3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Scn10aQ6QIY3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Scn10aQ6QIY3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC22.05■■□□□ 1.12
Scn10aQ6QIY3 Mir1199-201ENSMUST00000117015 119 ntBASIC22.05■■□□□ 1.12
Scn10aQ6QIY3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Scn10aQ6QIY3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC22.05■■□□□ 1.12
Scn10aQ6QIY3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Scn10aQ6QIY3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Scn10aQ6QIY3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Scn10aQ6QIY3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Scn10aQ6QIY3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Scn10aQ6QIY3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC22.05■■□□□ 1.12
Scn10aQ6QIY3 AC154649.1-201ENSMUST00000227392 384 ntBASIC22.05■■□□□ 1.12
Scn10aQ6QIY3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Scn10aQ6QIY3 Gm43672-201ENSMUST00000199072 1731 ntBASIC22.04■■□□□ 1.12
Scn10aQ6QIY3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Scn10aQ6QIY3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Scn10aQ6QIY3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC22.04■■□□□ 1.12
Scn10aQ6QIY3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Scn10aQ6QIY3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms