Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.26■□□□□ 0.19
Rif1Q6PR54 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rif1Q6PR54 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rif1Q6PR54 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rif1Q6PR54 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rif1Q6PR54 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Rif1Q6PR54 Gm30025-201ENSMUST00000218555 728 ntBASIC16.26■□□□□ 0.19
Rif1Q6PR54 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rif1Q6PR54 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.25■□□□□ 0.19
Rif1Q6PR54 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Rif1Q6PR54 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rif1Q6PR54 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rif1Q6PR54 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rif1Q6PR54 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rif1Q6PR54 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
Rif1Q6PR54 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rif1Q6PR54 Gm7284-201ENSMUST00000131667 944 ntBASIC16.24■□□□□ 0.19
Rif1Q6PR54 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rif1Q6PR54 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rif1Q6PR54 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.24■□□□□ 0.19
Rif1Q6PR54 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rif1Q6PR54 Gm21814-202ENSMUST00000203277 873 ntBASIC16.24■□□□□ 0.19
Rif1Q6PR54 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rif1Q6PR54 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rif1Q6PR54 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Rif1Q6PR54 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.23■□□□□ 0.19
Rif1Q6PR54 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rif1Q6PR54 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rif1Q6PR54 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rif1Q6PR54 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rif1Q6PR54 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rif1Q6PR54 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.23■□□□□ 0.19
Rif1Q6PR54 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rif1Q6PR54 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.22■□□□□ 0.19
Rif1Q6PR54 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Rif1Q6PR54 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.22■□□□□ 0.19
Rif1Q6PR54 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rif1Q6PR54 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rif1Q6PR54 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rif1Q6PR54 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rif1Q6PR54 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rif1Q6PR54 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.22■□□□□ 0.19
Rif1Q6PR54 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.21■□□□□ 0.19
Rif1Q6PR54 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.21■□□□□ 0.19
Rif1Q6PR54 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rif1Q6PR54 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rif1Q6PR54 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.21■□□□□ 0.19
Rif1Q6PR54 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rif1Q6PR54 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rif1Q6PR54 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rif1Q6PR54 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Rif1Q6PR54 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rif1Q6PR54 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Rif1Q6PR54 Gm6443-201ENSMUST00000203599 874 ntBASIC16.21■□□□□ 0.19
Rif1Q6PR54 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rif1Q6PR54 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rif1Q6PR54 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.21■□□□□ 0.19
Rif1Q6PR54 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rif1Q6PR54 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rif1Q6PR54 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rif1Q6PR54 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.21■□□□□ 0.18
Rif1Q6PR54 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Rif1Q6PR54 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rif1Q6PR54 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rif1Q6PR54 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rif1Q6PR54 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rif1Q6PR54 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rif1Q6PR54 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rif1Q6PR54 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rif1Q6PR54 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rif1Q6PR54 Gm13158-201ENSMUST00000122007 736 ntBASIC16.2■□□□□ 0.18
Rif1Q6PR54 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rif1Q6PR54 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rif1Q6PR54 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rif1Q6PR54 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rif1Q6PR54 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rif1Q6PR54 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rif1Q6PR54 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rif1Q6PR54 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rif1Q6PR54 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Rif1Q6PR54 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.19■□□□□ 0.18
Rif1Q6PR54 Gm28033-201ENSMUST00000184224 96 ntBASIC16.19■□□□□ 0.18
Rif1Q6PR54 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rif1Q6PR54 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rif1Q6PR54 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rif1Q6PR54 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rif1Q6PR54 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rif1Q6PR54 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rif1Q6PR54 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rif1Q6PR54 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.19■□□□□ 0.18
Rif1Q6PR54 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rif1Q6PR54 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rif1Q6PR54 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rif1Q6PR54 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rif1Q6PR54 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rif1Q6PR54 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rif1Q6PR54 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rif1Q6PR54 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rif1Q6PR54 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rif1Q6PR54 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms