Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cachd1Q6PDJ1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cachd1Q6PDJ1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cachd1Q6PDJ1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cachd1Q6PDJ1 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.43■□□□□ 0.7
Cachd1Q6PDJ1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cachd1Q6PDJ1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cachd1Q6PDJ1 Gm13146-201ENSMUST00000118508 780 ntBASIC19.43■□□□□ 0.7
Cachd1Q6PDJ1 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cachd1Q6PDJ1 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.43■□□□□ 0.7
Cachd1Q6PDJ1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cachd1Q6PDJ1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cachd1Q6PDJ1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cachd1Q6PDJ1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cachd1Q6PDJ1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cachd1Q6PDJ1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cachd1Q6PDJ1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cachd1Q6PDJ1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cachd1Q6PDJ1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cachd1Q6PDJ1 Gm15378-201ENSMUST00000121894 207 ntBASIC19.42■□□□□ 0.7
Cachd1Q6PDJ1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC19.42■□□□□ 0.7
Cachd1Q6PDJ1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cachd1Q6PDJ1 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cachd1Q6PDJ1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cachd1Q6PDJ1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cachd1Q6PDJ1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cachd1Q6PDJ1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cachd1Q6PDJ1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cachd1Q6PDJ1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cachd1Q6PDJ1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cachd1Q6PDJ1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.41■□□□□ 0.7
Cachd1Q6PDJ1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.41■□□□□ 0.7
Cachd1Q6PDJ1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cachd1Q6PDJ1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cachd1Q6PDJ1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cachd1Q6PDJ1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cachd1Q6PDJ1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cachd1Q6PDJ1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cachd1Q6PDJ1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cachd1Q6PDJ1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cachd1Q6PDJ1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cachd1Q6PDJ1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cachd1Q6PDJ1 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.4■□□□□ 0.7
Cachd1Q6PDJ1 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.4■□□□□ 0.7
Cachd1Q6PDJ1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cachd1Q6PDJ1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.4■□□□□ 0.7
Cachd1Q6PDJ1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cachd1Q6PDJ1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cachd1Q6PDJ1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Cachd1Q6PDJ1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cachd1Q6PDJ1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cachd1Q6PDJ1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cachd1Q6PDJ1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cachd1Q6PDJ1 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.39■□□□□ 0.69
Cachd1Q6PDJ1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cachd1Q6PDJ1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cachd1Q6PDJ1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cachd1Q6PDJ1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cachd1Q6PDJ1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cachd1Q6PDJ1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.38■□□□□ 0.69
Cachd1Q6PDJ1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cachd1Q6PDJ1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.38■□□□□ 0.69
Cachd1Q6PDJ1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Cachd1Q6PDJ1 Gm2559-201ENSMUST00000201323 363 ntBASIC19.38■□□□□ 0.69
Cachd1Q6PDJ1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cachd1Q6PDJ1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cachd1Q6PDJ1 Gm5417-201ENSMUST00000079706 384 ntBASIC19.38■□□□□ 0.69
Cachd1Q6PDJ1 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cachd1Q6PDJ1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cachd1Q6PDJ1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cachd1Q6PDJ1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cachd1Q6PDJ1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.37■□□□□ 0.69
Cachd1Q6PDJ1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cachd1Q6PDJ1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.37■□□□□ 0.69
Cachd1Q6PDJ1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cachd1Q6PDJ1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.37■□□□□ 0.69
Cachd1Q6PDJ1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cachd1Q6PDJ1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cachd1Q6PDJ1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cachd1Q6PDJ1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cachd1Q6PDJ1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.37■□□□□ 0.69
Cachd1Q6PDJ1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.37■□□□□ 0.69
Cachd1Q6PDJ1 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Cachd1Q6PDJ1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.36■□□□□ 0.69
Cachd1Q6PDJ1 Gm10698-201ENSMUST00000182663 604 ntBASIC19.36■□□□□ 0.69
Cachd1Q6PDJ1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cachd1Q6PDJ1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cachd1Q6PDJ1 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.36■□□□□ 0.69
Cachd1Q6PDJ1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cachd1Q6PDJ1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cachd1Q6PDJ1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cachd1Q6PDJ1 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.35■□□□□ 0.69
Cachd1Q6PDJ1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.35■□□□□ 0.69
Cachd1Q6PDJ1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cachd1Q6PDJ1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cachd1Q6PDJ1 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.35■□□□□ 0.69
Cachd1Q6PDJ1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.35■□□□□ 0.69
Cachd1Q6PDJ1 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.34■□□□□ 0.69
Cachd1Q6PDJ1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cachd1Q6PDJ1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms