Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.11■□□□□ 0.97
ShbQ6PD21 Gm2399-201ENSMUST00000104944 225 ntBASIC21.11■□□□□ 0.97
ShbQ6PD21 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
ShbQ6PD21 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.11■□□□□ 0.97
ShbQ6PD21 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ShbQ6PD21 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.11■□□□□ 0.97
ShbQ6PD21 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.11■□□□□ 0.97
ShbQ6PD21 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ShbQ6PD21 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ShbQ6PD21 Gm6433-201ENSMUST00000118634 875 ntBASIC21.1■□□□□ 0.97
ShbQ6PD21 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC21.1■□□□□ 0.97
ShbQ6PD21 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ShbQ6PD21 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ShbQ6PD21 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.1■□□□□ 0.97
ShbQ6PD21 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ShbQ6PD21 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ShbQ6PD21 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShbQ6PD21 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ShbQ6PD21 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC21.09■□□□□ 0.97
ShbQ6PD21 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ShbQ6PD21 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ShbQ6PD21 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ShbQ6PD21 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShbQ6PD21 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ShbQ6PD21 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ShbQ6PD21 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC21.08■□□□□ 0.97
ShbQ6PD21 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ShbQ6PD21 Mir5122-201ENSMUST00000175004 89 ntBASIC21.08■□□□□ 0.97
ShbQ6PD21 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ShbQ6PD21 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ShbQ6PD21 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ShbQ6PD21 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
ShbQ6PD21 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShbQ6PD21 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShbQ6PD21 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShbQ6PD21 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ShbQ6PD21 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.07■□□□□ 0.96
ShbQ6PD21 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.07■□□□□ 0.96
ShbQ6PD21 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShbQ6PD21 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShbQ6PD21 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShbQ6PD21 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.07■□□□□ 0.96
ShbQ6PD21 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ShbQ6PD21 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.06■□□□□ 0.96
ShbQ6PD21 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ShbQ6PD21 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ShbQ6PD21 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.06■□□□□ 0.96
ShbQ6PD21 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ShbQ6PD21 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ShbQ6PD21 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ShbQ6PD21 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ShbQ6PD21 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ShbQ6PD21 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
ShbQ6PD21 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.05■□□□□ 0.96
ShbQ6PD21 Gm43799-201ENSMUST00000201845 579 ntBASIC21.05■□□□□ 0.96
ShbQ6PD21 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ShbQ6PD21 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ShbQ6PD21 Gm10819-201ENSMUST00000099988 561 ntBASIC21.05■□□□□ 0.96
ShbQ6PD21 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ShbQ6PD21 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ShbQ6PD21 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ShbQ6PD21 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ShbQ6PD21 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ShbQ6PD21 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.04■□□□□ 0.96
ShbQ6PD21 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ShbQ6PD21 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.04■□□□□ 0.96
ShbQ6PD21 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ShbQ6PD21 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ShbQ6PD21 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ShbQ6PD21 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
ShbQ6PD21 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ShbQ6PD21 Gm13158-201ENSMUST00000122007 736 ntBASIC21.03■□□□□ 0.96
ShbQ6PD21 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.03■□□□□ 0.96
ShbQ6PD21 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ShbQ6PD21 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.03■□□□□ 0.96
ShbQ6PD21 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ShbQ6PD21 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ShbQ6PD21 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ShbQ6PD21 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21.03■□□□□ 0.96
ShbQ6PD21 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ShbQ6PD21 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ShbQ6PD21 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
ShbQ6PD21 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ShbQ6PD21 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ShbQ6PD21 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ShbQ6PD21 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ShbQ6PD21 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ShbQ6PD21 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
ShbQ6PD21 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
ShbQ6PD21 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ShbQ6PD21 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ShbQ6PD21 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.01■□□□□ 0.95
ShbQ6PD21 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ShbQ6PD21 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ShbQ6PD21 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.01■□□□□ 0.95
ShbQ6PD21 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ShbQ6PD21 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.01■□□□□ 0.95
ShbQ6PD21 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ShbQ6PD21 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ShbQ6PD21 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms