Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VclQ64727 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
VclQ64727 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.87■□□□□ 0.61
VclQ64727 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VclQ64727 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VclQ64727 Gm9988-201ENSMUST00000069786 435 ntBASIC18.87■□□□□ 0.61
VclQ64727 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VclQ64727 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VclQ64727 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VclQ64727 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VclQ64727 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
VclQ64727 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
VclQ64727 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VclQ64727 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.86■□□□□ 0.61
VclQ64727 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.86■□□□□ 0.61
VclQ64727 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
VclQ64727 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VclQ64727 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
VclQ64727 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VclQ64727 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VclQ64727 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
VclQ64727 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VclQ64727 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VclQ64727 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VclQ64727 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VclQ64727 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VclQ64727 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VclQ64727 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VclQ64727 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
VclQ64727 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VclQ64727 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VclQ64727 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.84■□□□□ 0.61
VclQ64727 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
VclQ64727 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.84■□□□□ 0.61
VclQ64727 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VclQ64727 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VclQ64727 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VclQ64727 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VclQ64727 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.83■□□□□ 0.61
VclQ64727 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
VclQ64727 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VclQ64727 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VclQ64727 Gm18671-201ENSMUST00000214826 683 ntBASIC18.83■□□□□ 0.6
VclQ64727 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VclQ64727 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VclQ64727 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VclQ64727 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VclQ64727 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VclQ64727 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
VclQ64727 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VclQ64727 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VclQ64727 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VclQ64727 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VclQ64727 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VclQ64727 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
VclQ64727 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
VclQ64727 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VclQ64727 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.82■□□□□ 0.6
VclQ64727 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VclQ64727 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.82■□□□□ 0.6
VclQ64727 Gm42642-201ENSMUST00000200683 355 ntBASIC18.82■□□□□ 0.6
VclQ64727 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VclQ64727 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
VclQ64727 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.82■□□□□ 0.6
VclQ64727 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VclQ64727 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VclQ64727 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VclQ64727 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VclQ64727 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VclQ64727 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VclQ64727 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VclQ64727 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.8■□□□□ 0.6
VclQ64727 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VclQ64727 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
VclQ64727 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
VclQ64727 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
VclQ64727 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VclQ64727 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VclQ64727 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.79■□□□□ 0.6
VclQ64727 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
VclQ64727 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
VclQ64727 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VclQ64727 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
VclQ64727 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
VclQ64727 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VclQ64727 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VclQ64727 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
VclQ64727 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VclQ64727 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.79■□□□□ 0.6
VclQ64727 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VclQ64727 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VclQ64727 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VclQ64727 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.78■□□□□ 0.6
VclQ64727 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.78■□□□□ 0.6
VclQ64727 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VclQ64727 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VclQ64727 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VclQ64727 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
VclQ64727 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VclQ64727 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms