Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc3Q64519 AA386476-201ENSMUST00000098781 1665 ntBASIC18.4■□□□□ 0.54
Sdc3Q64519 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc3Q64519 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sdc3Q64519 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Sdc3Q64519 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc3Q64519 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc3Q64519 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
Sdc3Q64519 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc3Q64519 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Sdc3Q64519 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.39■□□□□ 0.53
Sdc3Q64519 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc3Q64519 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc3Q64519 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc3Q64519 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc3Q64519 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc3Q64519 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.39■□□□□ 0.53
Sdc3Q64519 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sdc3Q64519 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdc3Q64519 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Sdc3Q64519 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.38■□□□□ 0.53
Sdc3Q64519 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.38■□□□□ 0.53
Sdc3Q64519 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.38■□□□□ 0.53
Sdc3Q64519 Reep4-203ENSMUST00000226563 1444 ntBASIC18.38■□□□□ 0.53
Sdc3Q64519 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Sdc3Q64519 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sdc3Q64519 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc3Q64519 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc3Q64519 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc3Q64519 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc3Q64519 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc3Q64519 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.37■□□□□ 0.53
Sdc3Q64519 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc3Q64519 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Sdc3Q64519 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sdc3Q64519 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc3Q64519 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Sdc3Q64519 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc3Q64519 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc3Q64519 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc3Q64519 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Sdc3Q64519 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.36■□□□□ 0.53
Sdc3Q64519 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Sdc3Q64519 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc3Q64519 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc3Q64519 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc3Q64519 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc3Q64519 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sdc3Q64519 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc3Q64519 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Sdc3Q64519 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc3Q64519 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc3Q64519 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc3Q64519 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc3Q64519 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc3Q64519 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc3Q64519 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc3Q64519 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc3Q64519 Gm29257-201ENSMUST00000186115 639 ntBASIC18.35■□□□□ 0.53
Sdc3Q64519 Gm7291-201ENSMUST00000199147 382 ntBASIC18.35■□□□□ 0.53
Sdc3Q64519 Gm10033-202ENSMUST00000211874 928 ntBASIC18.35■□□□□ 0.53
Sdc3Q64519 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc3Q64519 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc3Q64519 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc3Q64519 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sdc3Q64519 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sdc3Q64519 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.34■□□□□ 0.53
Sdc3Q64519 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Sdc3Q64519 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc3Q64519 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc3Q64519 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc3Q64519 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc3Q64519 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc3Q64519 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc3Q64519 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc3Q64519 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc3Q64519 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sdc3Q64519 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.34■□□□□ 0.53
Sdc3Q64519 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc3Q64519 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc3Q64519 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.34■□□□□ 0.53
Sdc3Q64519 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc3Q64519 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sdc3Q64519 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.33■□□□□ 0.53
Sdc3Q64519 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Sdc3Q64519 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc3Q64519 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.33■□□□□ 0.52
Sdc3Q64519 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.33■□□□□ 0.52
Sdc3Q64519 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.33■□□□□ 0.52
Sdc3Q64519 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.33■□□□□ 0.52
Sdc3Q64519 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc3Q64519 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc3Q64519 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc3Q64519 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc3Q64519 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sdc3Q64519 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.33■□□□□ 0.52
Sdc3Q64519 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc3Q64519 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc3Q64519 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdc3Q64519 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms