Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Six2Q62232 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Six2Q62232 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Six2Q62232 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Six2Q62232 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.55■□□□□ 0.88
Six2Q62232 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Six2Q62232 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Six2Q62232 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Six2Q62232 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Six2Q62232 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Six2Q62232 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Six2Q62232 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Six2Q62232 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Six2Q62232 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Six2Q62232 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Six2Q62232 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Six2Q62232 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Six2Q62232 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Six2Q62232 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six2Q62232 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six2Q62232 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six2Q62232 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.53■□□□□ 0.88
Six2Q62232 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.53■□□□□ 0.88
Six2Q62232 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six2Q62232 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six2Q62232 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six2Q62232 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.53■□□□□ 0.88
Six2Q62232 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Six2Q62232 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Six2Q62232 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Six2Q62232 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Six2Q62232 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Six2Q62232 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Six2Q62232 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.52■□□□□ 0.88
Six2Q62232 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Six2Q62232 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Six2Q62232 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Six2Q62232 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Six2Q62232 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Six2Q62232 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.51■□□□□ 0.87
Six2Q62232 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Six2Q62232 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Six2Q62232 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Six2Q62232 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Six2Q62232 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Six2Q62232 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Six2Q62232 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Six2Q62232 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Six2Q62232 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six2Q62232 BC021767-201ENSMUST00000126387 1716 ntBASIC20.5■□□□□ 0.87
Six2Q62232 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six2Q62232 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six2Q62232 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six2Q62232 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six2Q62232 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.5■□□□□ 0.87
Six2Q62232 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six2Q62232 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.5■□□□□ 0.87
Six2Q62232 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six2Q62232 Gm43017-201ENSMUST00000198296 752 ntBASIC20.5■□□□□ 0.87
Six2Q62232 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Six2Q62232 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.5■□□□□ 0.87
Six2Q62232 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six2Q62232 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six2Q62232 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Six2Q62232 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Six2Q62232 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Six2Q62232 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Six2Q62232 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Six2Q62232 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Six2Q62232 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Six2Q62232 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.49■□□□□ 0.87
Six2Q62232 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Six2Q62232 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.49■□□□□ 0.87
Six2Q62232 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Six2Q62232 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Six2Q62232 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Six2Q62232 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Six2Q62232 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Six2Q62232 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Six2Q62232 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Six2Q62232 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Six2Q62232 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Six2Q62232 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Six2Q62232 Gm40848-201ENSMUST00000221998 324 ntBASIC20.48■□□□□ 0.87
Six2Q62232 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Six2Q62232 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Six2Q62232 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Six2Q62232 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Six2Q62232 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Six2Q62232 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Six2Q62232 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Six2Q62232 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Six2Q62232 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.47■□□□□ 0.87
Six2Q62232 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Six2Q62232 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Six2Q62232 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.47■□□□□ 0.87
Six2Q62232 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Six2Q62232 Gm27801-201ENSMUST00000184174 223 ntBASIC20.47■□□□□ 0.87
Six2Q62232 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Six2Q62232 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms