Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Six1Q62231 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Six1Q62231 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six1Q62231 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six1Q62231 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six1Q62231 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six1Q62231 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Six1Q62231 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Six1Q62231 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.76■□□□□ 0.75
Six1Q62231 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Six1Q62231 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Six1Q62231 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Six1Q62231 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Six1Q62231 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.75■□□□□ 0.75
Six1Q62231 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.75■□□□□ 0.75
Six1Q62231 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Six1Q62231 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six1Q62231 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six1Q62231 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Six1Q62231 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.75■□□□□ 0.75
Six1Q62231 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.75■□□□□ 0.75
Six1Q62231 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six1Q62231 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Six1Q62231 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six1Q62231 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six1Q62231 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six1Q62231 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six1Q62231 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six1Q62231 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six1Q62231 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Six1Q62231 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Six1Q62231 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Six1Q62231 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six1Q62231 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six1Q62231 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Six1Q62231 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Six1Q62231 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six1Q62231 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six1Q62231 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six1Q62231 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Six1Q62231 Gm12251-201ENSMUST00000117893 792 ntBASIC19.73■□□□□ 0.75
Six1Q62231 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Six1Q62231 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six1Q62231 Spcs1-204ENSMUST00000226782 949 ntBASIC19.73■□□□□ 0.75
Six1Q62231 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six1Q62231 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Six1Q62231 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Six1Q62231 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
Six1Q62231 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Six1Q62231 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six1Q62231 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six1Q62231 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six1Q62231 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six1Q62231 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Six1Q62231 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.72■□□□□ 0.75
Six1Q62231 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six1Q62231 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six1Q62231 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Six1Q62231 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six1Q62231 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six1Q62231 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Six1Q62231 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six1Q62231 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six1Q62231 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Six1Q62231 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.71■□□□□ 0.75
Six1Q62231 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six1Q62231 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six1Q62231 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.71■□□□□ 0.75
Six1Q62231 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six1Q62231 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six1Q62231 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six1Q62231 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six1Q62231 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Six1Q62231 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Six1Q62231 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Six1Q62231 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.7■□□□□ 0.74
Six1Q62231 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.7■□□□□ 0.74
Six1Q62231 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Six1Q62231 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Six1Q62231 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six1Q62231 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six1Q62231 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six1Q62231 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Six1Q62231 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Six1Q62231 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Six1Q62231 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six1Q62231 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.69■□□□□ 0.74
Six1Q62231 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six1Q62231 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six1Q62231 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Six1Q62231 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six1Q62231 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six1Q62231 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.69■□□□□ 0.74
Six1Q62231 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six1Q62231 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six1Q62231 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Six1Q62231 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.69■□□□□ 0.74
Six1Q62231 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six1Q62231 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Six1Q62231 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms