Protein–RNA interactions for Protein: Q62191

Trim21, E3 ubiquitin-protein ligase TRIM21, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21Q62191 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim21Q62191 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim21Q62191 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim21Q62191 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim21Q62191 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.18■□□□□ 0.82
Trim21Q62191 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim21Q62191 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Trim21Q62191 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim21Q62191 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim21Q62191 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trim21Q62191 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim21Q62191 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim21Q62191 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim21Q62191 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim21Q62191 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.17■□□□□ 0.82
Trim21Q62191 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trim21Q62191 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim21Q62191 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.17■□□□□ 0.82
Trim21Q62191 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim21Q62191 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim21Q62191 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim21Q62191 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim21Q62191 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trim21Q62191 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Trim21Q62191 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim21Q62191 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim21Q62191 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim21Q62191 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Trim21Q62191 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim21Q62191 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim21Q62191 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.16■□□□□ 0.82
Trim21Q62191 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim21Q62191 Gm43137-201ENSMUST00000198052 594 ntBASIC20.16■□□□□ 0.82
Trim21Q62191 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim21Q62191 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim21Q62191 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.16■□□□□ 0.82
Trim21Q62191 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim21Q62191 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim21Q62191 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim21Q62191 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Trim21Q62191 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim21Q62191 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Trim21Q62191 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim21Q62191 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim21Q62191 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim21Q62191 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Trim21Q62191 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trim21Q62191 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim21Q62191 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.14■□□□□ 0.81
Trim21Q62191 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim21Q62191 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim21Q62191 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim21Q62191 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim21Q62191 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Trim21Q62191 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trim21Q62191 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim21Q62191 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Trim21Q62191 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim21Q62191 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim21Q62191 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim21Q62191 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim21Q62191 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim21Q62191 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim21Q62191 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim21Q62191 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.13■□□□□ 0.81
Trim21Q62191 Golph3-205ENSMUST00000228671 2842 ntBASIC20.13■□□□□ 0.81
Trim21Q62191 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trim21Q62191 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim21Q62191 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim21Q62191 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trim21Q62191 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim21Q62191 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trim21Q62191 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Trim21Q62191 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trim21Q62191 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trim21Q62191 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim21Q62191 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim21Q62191 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim21Q62191 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim21Q62191 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim21Q62191 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim21Q62191 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Trim21Q62191 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim21Q62191 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim21Q62191 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim21Q62191 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trim21Q62191 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trim21Q62191 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim21Q62191 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trim21Q62191 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim21Q62191 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.11■□□□□ 0.81
Trim21Q62191 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.11■□□□□ 0.81
Trim21Q62191 Spcs1-204ENSMUST00000226782 949 ntBASIC20.11■□□□□ 0.81
Trim21Q62191 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim21Q62191 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim21Q62191 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim21Q62191 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trim21Q62191 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim21Q62191 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim21Q62191 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms