Protein–RNA interactions for Protein: Q62177

Sema3b, Semaphorin-3B, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3bQ62177 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sema3bQ62177 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sema3bQ62177 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sema3bQ62177 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sema3bQ62177 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.22■□□□□ 0.51
Sema3bQ62177 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
Sema3bQ62177 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Sema3bQ62177 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sema3bQ62177 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sema3bQ62177 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sema3bQ62177 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sema3bQ62177 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sema3bQ62177 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.21■□□□□ 0.51
Sema3bQ62177 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sema3bQ62177 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.21■□□□□ 0.51
Sema3bQ62177 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Sema3bQ62177 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.21■□□□□ 0.51
Sema3bQ62177 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sema3bQ62177 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sema3bQ62177 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sema3bQ62177 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.21■□□□□ 0.51
Sema3bQ62177 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sema3bQ62177 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Sema3bQ62177 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sema3bQ62177 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.21■□□□□ 0.51
Sema3bQ62177 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Sema3bQ62177 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sema3bQ62177 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sema3bQ62177 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sema3bQ62177 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sema3bQ62177 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sema3bQ62177 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.2■□□□□ 0.5
Sema3bQ62177 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sema3bQ62177 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sema3bQ62177 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sema3bQ62177 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Sema3bQ62177 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.2■□□□□ 0.5
Sema3bQ62177 Gm22325-201ENSMUST00000158904 308 ntBASIC18.2■□□□□ 0.5
Sema3bQ62177 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sema3bQ62177 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.2■□□□□ 0.5
Sema3bQ62177 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sema3bQ62177 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sema3bQ62177 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sema3bQ62177 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sema3bQ62177 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sema3bQ62177 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.2■□□□□ 0.5
Sema3bQ62177 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.2■□□□□ 0.5
Sema3bQ62177 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sema3bQ62177 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sema3bQ62177 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sema3bQ62177 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.19■□□□□ 0.5
Sema3bQ62177 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sema3bQ62177 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sema3bQ62177 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.19■□□□□ 0.5
Sema3bQ62177 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sema3bQ62177 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sema3bQ62177 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sema3bQ62177 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sema3bQ62177 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Sema3bQ62177 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sema3bQ62177 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sema3bQ62177 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sema3bQ62177 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sema3bQ62177 Gm7290-201ENSMUST00000104990 617 ntBASIC18.18■□□□□ 0.5
Sema3bQ62177 Gm12918-201ENSMUST00000120234 636 ntBASIC18.18■□□□□ 0.5
Sema3bQ62177 Gm15710-201ENSMUST00000121821 636 ntBASIC18.18■□□□□ 0.5
Sema3bQ62177 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sema3bQ62177 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.18■□□□□ 0.5
Sema3bQ62177 Gm5075-201ENSMUST00000196916 622 ntBASIC18.18■□□□□ 0.5
Sema3bQ62177 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Sema3bQ62177 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.18■□□□□ 0.5
Sema3bQ62177 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.18■□□□□ 0.5
Sema3bQ62177 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sema3bQ62177 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sema3bQ62177 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sema3bQ62177 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sema3bQ62177 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sema3bQ62177 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sema3bQ62177 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sema3bQ62177 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sema3bQ62177 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sema3bQ62177 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.17■□□□□ 0.5
Sema3bQ62177 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sema3bQ62177 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sema3bQ62177 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sema3bQ62177 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Sema3bQ62177 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sema3bQ62177 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sema3bQ62177 Gm13148-201ENSMUST00000118892 745 ntBASIC18.16■□□□□ 0.5
Sema3bQ62177 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.16■□□□□ 0.5
Sema3bQ62177 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.16■□□□□ 0.5
Sema3bQ62177 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sema3bQ62177 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sema3bQ62177 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.16■□□□□ 0.5
Sema3bQ62177 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sema3bQ62177 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sema3bQ62177 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sema3bQ62177 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sema3bQ62177 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sema3bQ62177 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms