Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cd47Q61735 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd47Q61735 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd47Q61735 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cd47Q61735 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd47Q61735 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd47Q61735 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd47Q61735 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.38■□□□□ 0.37
Cd47Q61735 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd47Q61735 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Cd47Q61735 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.38■□□□□ 0.37
Cd47Q61735 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cd47Q61735 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Cd47Q61735 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd47Q61735 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cd47Q61735 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd47Q61735 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.38■□□□□ 0.37
Cd47Q61735 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cd47Q61735 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd47Q61735 Gm9847-201ENSMUST00000052528 599 ntBASIC17.38■□□□□ 0.37
Cd47Q61735 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd47Q61735 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd47Q61735 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd47Q61735 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Cd47Q61735 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd47Q61735 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd47Q61735 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd47Q61735 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd47Q61735 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd47Q61735 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cd47Q61735 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd47Q61735 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd47Q61735 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cd47Q61735 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.37■□□□□ 0.37
Cd47Q61735 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cd47Q61735 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd47Q61735 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.37■□□□□ 0.37
Cd47Q61735 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd47Q61735 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd47Q61735 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd47Q61735 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd47Q61735 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cd47Q61735 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cd47Q61735 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.36■□□□□ 0.37
Cd47Q61735 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cd47Q61735 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cd47Q61735 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd47Q61735 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd47Q61735 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cd47Q61735 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd47Q61735 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd47Q61735 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd47Q61735 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Cd47Q61735 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cd47Q61735 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Cd47Q61735 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd47Q61735 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cd47Q61735 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cd47Q61735 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cd47Q61735 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.35■□□□□ 0.37
Cd47Q61735 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Cd47Q61735 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd47Q61735 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd47Q61735 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd47Q61735 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cd47Q61735 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd47Q61735 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd47Q61735 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.34■□□□□ 0.37
Cd47Q61735 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd47Q61735 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd47Q61735 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd47Q61735 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd47Q61735 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd47Q61735 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd47Q61735 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd47Q61735 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cd47Q61735 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd47Q61735 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cd47Q61735 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cd47Q61735 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Cd47Q61735 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.33■□□□□ 0.37
Cd47Q61735 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.33■□□□□ 0.37
Cd47Q61735 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Cd47Q61735 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.33■□□□□ 0.36
Cd47Q61735 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cd47Q61735 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd47Q61735 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd47Q61735 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd47Q61735 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd47Q61735 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd47Q61735 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Cd47Q61735 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd47Q61735 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.32■□□□□ 0.36
Cd47Q61735 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd47Q61735 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd47Q61735 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cd47Q61735 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Cd47Q61735 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd47Q61735 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd47Q61735 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms