Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox17Q61473 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox17Q61473 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox17Q61473 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sox17Q61473 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.01■□□□□ 0.47
Sox17Q61473 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox17Q61473 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sox17Q61473 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sox17Q61473 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sox17Q61473 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox17Q61473 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18■□□□□ 0.47
Sox17Q61473 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox17Q61473 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Sox17Q61473 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox17Q61473 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox17Q61473 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Sox17Q61473 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox17Q61473 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18■□□□□ 0.47
Sox17Q61473 AC124603.1-201ENSMUST00000223843 308 ntBASIC18■□□□□ 0.47
Sox17Q61473 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Sox17Q61473 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox17Q61473 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Sox17Q61473 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox17Q61473 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sox17Q61473 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sox17Q61473 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Sox17Q61473 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Sox17Q61473 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox17Q61473 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox17Q61473 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sox17Q61473 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sox17Q61473 Gm40881-201ENSMUST00000223397 166 ntBASIC17.99■□□□□ 0.47
Sox17Q61473 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox17Q61473 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox17Q61473 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sox17Q61473 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Sox17Q61473 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Sox17Q61473 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Sox17Q61473 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox17Q61473 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox17Q61473 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox17Q61473 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Sox17Q61473 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox17Q61473 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.98■□□□□ 0.47
Sox17Q61473 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.98■□□□□ 0.47
Sox17Q61473 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Sox17Q61473 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sox17Q61473 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox17Q61473 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Sox17Q61473 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sox17Q61473 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Sox17Q61473 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.97■□□□□ 0.47
Sox17Q61473 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox17Q61473 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox17Q61473 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sox17Q61473 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox17Q61473 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox17Q61473 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox17Q61473 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox17Q61473 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox17Q61473 Gm5921-201ENSMUST00000075898 882 ntBASIC17.97■□□□□ 0.47
Sox17Q61473 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Sox17Q61473 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox17Q61473 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sox17Q61473 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox17Q61473 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox17Q61473 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Sox17Q61473 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox17Q61473 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sox17Q61473 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox17Q61473 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox17Q61473 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.96■□□□□ 0.47
Sox17Q61473 Cap2-205ENSMUST00000225824 1634 ntBASIC17.96■□□□□ 0.47
Sox17Q61473 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox17Q61473 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox17Q61473 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sox17Q61473 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox17Q61473 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sox17Q61473 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Sox17Q61473 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sox17Q61473 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox17Q61473 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox17Q61473 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Sox17Q61473 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.95■□□□□ 0.46
Sox17Q61473 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.95■□□□□ 0.46
Sox17Q61473 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox17Q61473 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox17Q61473 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sox17Q61473 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
Sox17Q61473 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox17Q61473 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox17Q61473 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox17Q61473 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox17Q61473 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.94■□□□□ 0.46
Sox17Q61473 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.94■□□□□ 0.46
Sox17Q61473 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sox17Q61473 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.94■□□□□ 0.46
Sox17Q61473 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.94■□□□□ 0.46
Sox17Q61473 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sox17Q61473 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms