Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Traf4Q61382 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Traf4Q61382 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Traf4Q61382 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Traf4Q61382 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Traf4Q61382 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Traf4Q61382 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Traf4Q61382 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Traf4Q61382 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Traf4Q61382 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Traf4Q61382 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Traf4Q61382 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Traf4Q61382 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Traf4Q61382 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Traf4Q61382 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Traf4Q61382 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.91■□□□□ 0.3
Traf4Q61382 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.91■□□□□ 0.3
Traf4Q61382 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Traf4Q61382 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Traf4Q61382 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Traf4Q61382 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Traf4Q61382 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.91■□□□□ 0.3
Traf4Q61382 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Traf4Q61382 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Traf4Q61382 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Traf4Q61382 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Traf4Q61382 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Traf4Q61382 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Traf4Q61382 Golph3-205ENSMUST00000228671 2842 ntBASIC16.9■□□□□ 0.3
Traf4Q61382 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Traf4Q61382 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Traf4Q61382 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.9■□□□□ 0.3
Traf4Q61382 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Traf4Q61382 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Traf4Q61382 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Traf4Q61382 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Traf4Q61382 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Traf4Q61382 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Traf4Q61382 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
Traf4Q61382 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.9■□□□□ 0.3
Traf4Q61382 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Traf4Q61382 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Traf4Q61382 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Traf4Q61382 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Traf4Q61382 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Traf4Q61382 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Traf4Q61382 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Traf4Q61382 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Traf4Q61382 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Traf4Q61382 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Traf4Q61382 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Traf4Q61382 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Traf4Q61382 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Traf4Q61382 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.89■□□□□ 0.29
Traf4Q61382 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Traf4Q61382 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.89■□□□□ 0.29
Traf4Q61382 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Traf4Q61382 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.89■□□□□ 0.29
Traf4Q61382 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.89■□□□□ 0.29
Traf4Q61382 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Traf4Q61382 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.89■□□□□ 0.29
Traf4Q61382 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Traf4Q61382 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Traf4Q61382 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Traf4Q61382 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Traf4Q61382 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Traf4Q61382 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.89■□□□□ 0.29
Traf4Q61382 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Traf4Q61382 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Traf4Q61382 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Traf4Q61382 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Traf4Q61382 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Traf4Q61382 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Traf4Q61382 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Traf4Q61382 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Traf4Q61382 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Traf4Q61382 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Traf4Q61382 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.88■□□□□ 0.29
Traf4Q61382 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.88■□□□□ 0.29
Traf4Q61382 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.88■□□□□ 0.29
Traf4Q61382 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.88■□□□□ 0.29
Traf4Q61382 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.88■□□□□ 0.29
Traf4Q61382 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Traf4Q61382 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Traf4Q61382 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Traf4Q61382 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Traf4Q61382 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Traf4Q61382 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Traf4Q61382 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Traf4Q61382 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Traf4Q61382 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Traf4Q61382 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Traf4Q61382 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Traf4Q61382 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.87■□□□□ 0.29
Traf4Q61382 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Traf4Q61382 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Traf4Q61382 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Traf4Q61382 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Traf4Q61382 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Traf4Q61382 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms