Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC28.18■■■□□ 2.1
Ptch1Q61115 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Ptch1Q61115 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC28.18■■■□□ 2.1
Ptch1Q61115 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Ptch1Q61115 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Ptch1Q61115 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Ptch1Q61115 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Ptch1Q61115 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Ptch1Q61115 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC28.18■■■□□ 2.1
Ptch1Q61115 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
Ptch1Q61115 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ptch1Q61115 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ptch1Q61115 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Ptch1Q61115 Gm10231-201ENSMUST00000181584 441 ntBASIC28.17■■■□□ 2.1
Ptch1Q61115 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ptch1Q61115 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Ptch1Q61115 Gm10175-202ENSMUST00000208752 441 ntBASIC28.17■■■□□ 2.1
Ptch1Q61115 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ptch1Q61115 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ptch1Q61115 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Ptch1Q61115 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
Ptch1Q61115 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Ptch1Q61115 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC28.16■■■□□ 2.1
Ptch1Q61115 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Ptch1Q61115 CT010444.2-201ENSMUST00000217877 1629 ntBASIC28.16■■■□□ 2.1
Ptch1Q61115 Mir5122-201ENSMUST00000175004 89 ntBASIC28.16■■■□□ 2.1
Ptch1Q61115 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Ptch1Q61115 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC28.16■■■□□ 2.1
Ptch1Q61115 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Ptch1Q61115 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Ptch1Q61115 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC28.15■■■□□ 2.1
Ptch1Q61115 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC28.15■■■□□ 2.1
Ptch1Q61115 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
Ptch1Q61115 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC28.15■■■□□ 2.1
Ptch1Q61115 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Ptch1Q61115 Gm15043-201ENSMUST00000118843 1543 ntBASIC28.14■■■□□ 2.1
Ptch1Q61115 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Ptch1Q61115 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC28.14■■■□□ 2.1
Ptch1Q61115 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Ptch1Q61115 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC28.14■■■□□ 2.1
Ptch1Q61115 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Ptch1Q61115 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC28.14■■■□□ 2.09
Ptch1Q61115 Gm10167-201ENSMUST00000150411 1479 ntBASIC28.14■■■□□ 2.09
Ptch1Q61115 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ptch1Q61115 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Ptch1Q61115 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
Ptch1Q61115 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Ptch1Q61115 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ptch1Q61115 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ptch1Q61115 Gm15378-201ENSMUST00000121894 207 ntBASIC28.13■■■□□ 2.09
Ptch1Q61115 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC28.13■■■□□ 2.09
Ptch1Q61115 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC28.13■■■□□ 2.09
Ptch1Q61115 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ptch1Q61115 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ptch1Q61115 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ptch1Q61115 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ptch1Q61115 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ptch1Q61115 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC28.12■■■□□ 2.09
Ptch1Q61115 Gm26971-201ENSMUST00000182423 1072 ntBASIC28.12■■■□□ 2.09
Ptch1Q61115 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Ptch1Q61115 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC28.12■■■□□ 2.09
Ptch1Q61115 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Ptch1Q61115 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28.12■■■□□ 2.09
Ptch1Q61115 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Ptch1Q61115 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Ptch1Q61115 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Ptch1Q61115 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Ptch1Q61115 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Ptch1Q61115 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Ptch1Q61115 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Ptch1Q61115 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC28.1■■■□□ 2.09
Ptch1Q61115 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC28.1■■■□□ 2.09
Ptch1Q61115 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ptch1Q61115 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ptch1Q61115 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ptch1Q61115 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ptch1Q61115 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ptch1Q61115 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ptch1Q61115 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ptch1Q61115 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ptch1Q61115 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ptch1Q61115 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ptch1Q61115 Gm10819-201ENSMUST00000099988 561 ntBASIC28.09■■■□□ 2.09
Ptch1Q61115 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Ptch1Q61115 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ptch1Q61115 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ptch1Q61115 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ptch1Q61115 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Ptch1Q61115 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
Ptch1Q61115 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC28.08■■■□□ 2.09
Ptch1Q61115 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC28.08■■■□□ 2.09
Ptch1Q61115 AC163280.1-201ENSMUST00000228194 1100 ntBASIC28.08■■■□□ 2.09
Ptch1Q61115 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Ptch1Q61115 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
Ptch1Q61115 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Ptch1Q61115 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Ptch1Q61115 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Ptch1Q61115 Gm43799-201ENSMUST00000201845 579 ntBASIC28.07■■■□□ 2.08
Ptch1Q61115 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC28.07■■■□□ 2.08
Ptch1Q61115 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms