Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.8■□□□□ 0.6
Sim2Q61079 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Sim2Q61079 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.8■□□□□ 0.6
Sim2Q61079 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sim2Q61079 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sim2Q61079 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sim2Q61079 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.8■□□□□ 0.6
Sim2Q61079 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sim2Q61079 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sim2Q61079 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sim2Q61079 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sim2Q61079 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sim2Q61079 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.79■□□□□ 0.6
Sim2Q61079 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Sim2Q61079 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sim2Q61079 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sim2Q61079 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sim2Q61079 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sim2Q61079 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.78■□□□□ 0.6
Sim2Q61079 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sim2Q61079 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sim2Q61079 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sim2Q61079 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sim2Q61079 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sim2Q61079 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sim2Q61079 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.78■□□□□ 0.6
Sim2Q61079 Gm715-201ENSMUST00000117865 831 ntBASIC18.78■□□□□ 0.6
Sim2Q61079 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sim2Q61079 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sim2Q61079 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sim2Q61079 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.78■□□□□ 0.6
Sim2Q61079 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sim2Q61079 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sim2Q61079 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sim2Q61079 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sim2Q61079 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sim2Q61079 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.77■□□□□ 0.6
Sim2Q61079 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sim2Q61079 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Sim2Q61079 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.77■□□□□ 0.6
Sim2Q61079 Gm2559-201ENSMUST00000201323 363 ntBASIC18.77■□□□□ 0.6
Sim2Q61079 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sim2Q61079 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sim2Q61079 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.77■□□□□ 0.6
Sim2Q61079 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sim2Q61079 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sim2Q61079 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sim2Q61079 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sim2Q61079 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Sim2Q61079 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sim2Q61079 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.76■□□□□ 0.59
Sim2Q61079 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sim2Q61079 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sim2Q61079 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sim2Q61079 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sim2Q61079 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.76■□□□□ 0.59
Sim2Q61079 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.76■□□□□ 0.59
Sim2Q61079 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.76■□□□□ 0.59
Sim2Q61079 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.76■□□□□ 0.59
Sim2Q61079 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sim2Q61079 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.76■□□□□ 0.59
Sim2Q61079 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sim2Q61079 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Sim2Q61079 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sim2Q61079 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sim2Q61079 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sim2Q61079 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sim2Q61079 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.75■□□□□ 0.59
Sim2Q61079 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.75■□□□□ 0.59
Sim2Q61079 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sim2Q61079 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sim2Q61079 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sim2Q61079 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sim2Q61079 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sim2Q61079 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.74■□□□□ 0.59
Sim2Q61079 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.74■□□□□ 0.59
Sim2Q61079 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sim2Q61079 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sim2Q61079 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sim2Q61079 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.74■□□□□ 0.59
Sim2Q61079 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sim2Q61079 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Sim2Q61079 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sim2Q61079 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sim2Q61079 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sim2Q61079 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sim2Q61079 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sim2Q61079 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sim2Q61079 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sim2Q61079 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sim2Q61079 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sim2Q61079 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Sim2Q61079 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sim2Q61079 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sim2Q61079 AA386476-201ENSMUST00000098781 1665 ntBASIC18.73■□□□□ 0.59
Sim2Q61079 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sim2Q61079 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Sim2Q61079 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sim2Q61079 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sim2Q61079 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms