Protein–RNA interactions for Protein: Q61060

Foxd3, Forkhead box protein D3, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd3Q61060 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Foxd3Q61060 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Foxd3Q61060 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.54■□□□□ 0.4
Foxd3Q61060 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Foxd3Q61060 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.54■□□□□ 0.4
Foxd3Q61060 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Foxd3Q61060 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.54■□□□□ 0.4
Foxd3Q61060 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Foxd3Q61060 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Foxd3Q61060 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Foxd3Q61060 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd3Q61060 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd3Q61060 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Foxd3Q61060 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd3Q61060 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd3Q61060 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd3Q61060 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd3Q61060 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd3Q61060 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd3Q61060 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd3Q61060 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.53■□□□□ 0.4
Foxd3Q61060 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.53■□□□□ 0.4
Foxd3Q61060 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Foxd3Q61060 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.53■□□□□ 0.4
Foxd3Q61060 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd3Q61060 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd3Q61060 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Foxd3Q61060 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxd3Q61060 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxd3Q61060 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.52■□□□□ 0.4
Foxd3Q61060 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Foxd3Q61060 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Foxd3Q61060 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Foxd3Q61060 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxd3Q61060 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Foxd3Q61060 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxd3Q61060 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxd3Q61060 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxd3Q61060 Gm6139-201ENSMUST00000079261 882 ntBASIC17.52■□□□□ 0.4
Foxd3Q61060 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Foxd3Q61060 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Foxd3Q61060 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Foxd3Q61060 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Foxd3Q61060 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Foxd3Q61060 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Foxd3Q61060 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Foxd3Q61060 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Foxd3Q61060 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Foxd3Q61060 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd3Q61060 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.5■□□□□ 0.39
Foxd3Q61060 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Foxd3Q61060 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.5■□□□□ 0.39
Foxd3Q61060 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd3Q61060 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd3Q61060 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd3Q61060 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd3Q61060 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd3Q61060 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd3Q61060 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Foxd3Q61060 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Foxd3Q61060 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Foxd3Q61060 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxd3Q61060 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Foxd3Q61060 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Foxd3Q61060 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxd3Q61060 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
Foxd3Q61060 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxd3Q61060 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Foxd3Q61060 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxd3Q61060 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.49■□□□□ 0.39
Foxd3Q61060 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxd3Q61060 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.49■□□□□ 0.39
Foxd3Q61060 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxd3Q61060 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxd3Q61060 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.49■□□□□ 0.39
Foxd3Q61060 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxd3Q61060 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Foxd3Q61060 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.48■□□□□ 0.39
Foxd3Q61060 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd3Q61060 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd3Q61060 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd3Q61060 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Foxd3Q61060 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.48■□□□□ 0.39
Foxd3Q61060 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd3Q61060 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.48■□□□□ 0.39
Foxd3Q61060 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd3Q61060 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd3Q61060 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd3Q61060 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd3Q61060 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.48■□□□□ 0.39
Foxd3Q61060 Gm43137-201ENSMUST00000198052 594 ntBASIC17.48■□□□□ 0.39
Foxd3Q61060 Gm43017-201ENSMUST00000198296 752 ntBASIC17.48■□□□□ 0.39
Foxd3Q61060 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd3Q61060 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.48■□□□□ 0.39
Foxd3Q61060 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd3Q61060 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd3Q61060 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd3Q61060 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Foxd3Q61060 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Foxd3Q61060 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms