Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Scarb1Q61009 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Scarb1Q61009 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Scarb1Q61009 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Scarb1Q61009 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Scarb1Q61009 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scarb1Q61009 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scarb1Q61009 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scarb1Q61009 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Scarb1Q61009 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scarb1Q61009 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scarb1Q61009 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scarb1Q61009 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scarb1Q61009 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scarb1Q61009 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.15■□□□□ 0.18
Scarb1Q61009 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Scarb1Q61009 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Scarb1Q61009 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scarb1Q61009 Cap2-205ENSMUST00000225824 1634 ntBASIC16.15■□□□□ 0.18
Scarb1Q61009 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.15■□□□□ 0.18
Scarb1Q61009 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Scarb1Q61009 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scarb1Q61009 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scarb1Q61009 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scarb1Q61009 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scarb1Q61009 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Scarb1Q61009 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scarb1Q61009 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.14■□□□□ 0.17
Scarb1Q61009 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Scarb1Q61009 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scarb1Q61009 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scarb1Q61009 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Scarb1Q61009 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Scarb1Q61009 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.14■□□□□ 0.17
Scarb1Q61009 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scarb1Q61009 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scarb1Q61009 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scarb1Q61009 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scarb1Q61009 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Scarb1Q61009 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scarb1Q61009 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scarb1Q61009 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scarb1Q61009 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.13■□□□□ 0.17
Scarb1Q61009 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
Scarb1Q61009 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scarb1Q61009 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Scarb1Q61009 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scarb1Q61009 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.13■□□□□ 0.17
Scarb1Q61009 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scarb1Q61009 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Scarb1Q61009 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Scarb1Q61009 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scarb1Q61009 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scarb1Q61009 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scarb1Q61009 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scarb1Q61009 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scarb1Q61009 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Scarb1Q61009 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Scarb1Q61009 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.12■□□□□ 0.17
Scarb1Q61009 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scarb1Q61009 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scarb1Q61009 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scarb1Q61009 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Scarb1Q61009 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.12■□□□□ 0.17
Scarb1Q61009 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scarb1Q61009 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Scarb1Q61009 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scarb1Q61009 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.11■□□□□ 0.17
Scarb1Q61009 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scarb1Q61009 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scarb1Q61009 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scarb1Q61009 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.11■□□□□ 0.17
Scarb1Q61009 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scarb1Q61009 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Scarb1Q61009 Gm40881-201ENSMUST00000223397 166 ntBASIC16.11■□□□□ 0.17
Scarb1Q61009 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scarb1Q61009 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Scarb1Q61009 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scarb1Q61009 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.1■□□□□ 0.17
Scarb1Q61009 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarb1Q61009 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Scarb1Q61009 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarb1Q61009 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.1■□□□□ 0.17
Scarb1Q61009 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scarb1Q61009 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scarb1Q61009 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarb1Q61009 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.1■□□□□ 0.17
Scarb1Q61009 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarb1Q61009 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarb1Q61009 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarb1Q61009 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scarb1Q61009 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarb1Q61009 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarb1Q61009 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarb1Q61009 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarb1Q61009 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scarb1Q61009 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarb1Q61009 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarb1Q61009 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scarb1Q61009 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms