Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.07■□□□□ 0.48
Ripk1Q60855 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.07■□□□□ 0.48
Ripk1Q60855 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ripk1Q60855 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ripk1Q60855 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ripk1Q60855 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ripk1Q60855 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ripk1Q60855 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ripk1Q60855 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ripk1Q60855 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ripk1Q60855 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ripk1Q60855 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ripk1Q60855 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ripk1Q60855 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ripk1Q60855 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.06■□□□□ 0.48
Ripk1Q60855 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ripk1Q60855 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ripk1Q60855 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ripk1Q60855 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ripk1Q60855 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ripk1Q60855 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ripk1Q60855 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.06■□□□□ 0.48
Ripk1Q60855 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ripk1Q60855 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ripk1Q60855 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ripk1Q60855 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ripk1Q60855 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.05■□□□□ 0.48
Ripk1Q60855 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Ripk1Q60855 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.05■□□□□ 0.48
Ripk1Q60855 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ripk1Q60855 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ripk1Q60855 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ripk1Q60855 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ripk1Q60855 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ripk1Q60855 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ripk1Q60855 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Ripk1Q60855 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ripk1Q60855 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ripk1Q60855 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ripk1Q60855 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.04■□□□□ 0.48
Ripk1Q60855 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Ripk1Q60855 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.04■□□□□ 0.48
Ripk1Q60855 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ripk1Q60855 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.04■□□□□ 0.48
Ripk1Q60855 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Ripk1Q60855 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.04■□□□□ 0.48
Ripk1Q60855 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ripk1Q60855 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ripk1Q60855 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
Ripk1Q60855 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ripk1Q60855 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ripk1Q60855 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.04■□□□□ 0.48
Ripk1Q60855 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ripk1Q60855 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.03■□□□□ 0.48
Ripk1Q60855 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ripk1Q60855 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ripk1Q60855 Gm8493-201ENSMUST00000196881 489 ntBASIC18.03■□□□□ 0.48
Ripk1Q60855 Gm43173-201ENSMUST00000202246 593 ntBASIC18.03■□□□□ 0.48
Ripk1Q60855 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ripk1Q60855 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ripk1Q60855 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ripk1Q60855 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ripk1Q60855 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ripk1Q60855 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ripk1Q60855 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ripk1Q60855 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ripk1Q60855 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ripk1Q60855 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ripk1Q60855 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ripk1Q60855 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ripk1Q60855 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ripk1Q60855 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.02■□□□□ 0.48
Ripk1Q60855 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ripk1Q60855 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ripk1Q60855 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ripk1Q60855 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ripk1Q60855 Gm45417-201ENSMUST00000209533 758 ntBASIC18.01■□□□□ 0.47
Ripk1Q60855 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ripk1Q60855 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ripk1Q60855 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ripk1Q60855 Smad6-203ENSMUST00000179458 273 ntBASIC18■□□□□ 0.47
Ripk1Q60855 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ripk1Q60855 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ripk1Q60855 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ripk1Q60855 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ripk1Q60855 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ripk1Q60855 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ripk1Q60855 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ripk1Q60855 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ripk1Q60855 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ripk1Q60855 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Ripk1Q60855 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ripk1Q60855 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.99■□□□□ 0.47
Ripk1Q60855 Gm6139-201ENSMUST00000079261 882 ntBASIC17.99■□□□□ 0.47
Ripk1Q60855 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ripk1Q60855 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ripk1Q60855 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ripk1Q60855 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ripk1Q60855 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ripk1Q60855 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms