Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav8d-1Q5R1H8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-1Q5R1H8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav8d-1Q5R1H8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav8d-1Q5R1H8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trav8d-1Q5R1H8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-1Q5R1H8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-1Q5R1H8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-1Q5R1H8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Trav8d-1Q5R1H8 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav8d-1Q5R1H8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-1Q5R1H8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-1Q5R1H8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-1Q5R1H8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 Gm22238-201ENSMUST00000175222 88 ntBASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav8d-1Q5R1H8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-1Q5R1H8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-1Q5R1H8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-1Q5R1H8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav8d-1Q5R1H8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-1Q5R1H8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-1Q5R1H8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-1Q5R1H8 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-1Q5R1H8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-1Q5R1H8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav8d-1Q5R1H8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.65■□□□□ 0.1
Trav8d-1Q5R1H8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav8d-1Q5R1H8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-1Q5R1H8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-1Q5R1H8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trav8d-1Q5R1H8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-1Q5R1H8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-1Q5R1H8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-1Q5R1H8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav8d-1Q5R1H8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-1Q5R1H8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-1Q5R1H8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-1Q5R1H8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-1Q5R1H8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-1Q5R1H8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-1Q5R1H8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-1Q5R1H8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-1Q5R1H8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-1Q5R1H8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-1Q5R1H8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-1Q5R1H8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav8d-1Q5R1H8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav8d-1Q5R1H8 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.64■□□□□ 0.09
Trav8d-1Q5R1H8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav8d-1Q5R1H8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8d-1Q5R1H8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8d-1Q5R1H8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8d-1Q5R1H8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8d-1Q5R1H8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav8d-1Q5R1H8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8d-1Q5R1H8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Trav8d-1Q5R1H8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.62■□□□□ 0.09
Trav8d-1Q5R1H8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
Trav8d-1Q5R1H8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav8d-1Q5R1H8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms