Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn2bQ56A07 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.97■□□□□ 0.63
Scn2bQ56A07 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn2bQ56A07 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn2bQ56A07 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn2bQ56A07 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn2bQ56A07 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Scn2bQ56A07 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn2bQ56A07 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn2bQ56A07 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn2bQ56A07 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Scn2bQ56A07 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Scn2bQ56A07 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Scn2bQ56A07 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.97■□□□□ 0.63
Scn2bQ56A07 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn2bQ56A07 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn2bQ56A07 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Scn2bQ56A07 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn2bQ56A07 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.96■□□□□ 0.63
Scn2bQ56A07 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.96■□□□□ 0.63
Scn2bQ56A07 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn2bQ56A07 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn2bQ56A07 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.96■□□□□ 0.63
Scn2bQ56A07 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn2bQ56A07 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn2bQ56A07 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Scn2bQ56A07 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Scn2bQ56A07 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn2bQ56A07 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn2bQ56A07 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn2bQ56A07 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn2bQ56A07 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn2bQ56A07 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn2bQ56A07 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.95■□□□□ 0.62
Scn2bQ56A07 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Scn2bQ56A07 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Scn2bQ56A07 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn2bQ56A07 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn2bQ56A07 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn2bQ56A07 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Scn2bQ56A07 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Scn2bQ56A07 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
Scn2bQ56A07 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.94■□□□□ 0.62
Scn2bQ56A07 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Scn2bQ56A07 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn2bQ56A07 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn2bQ56A07 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn2bQ56A07 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scn2bQ56A07 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.93■□□□□ 0.62
Scn2bQ56A07 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn2bQ56A07 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scn2bQ56A07 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Scn2bQ56A07 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.93■□□□□ 0.62
Scn2bQ56A07 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn2bQ56A07 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn2bQ56A07 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn2bQ56A07 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn2bQ56A07 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn2bQ56A07 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.93■□□□□ 0.62
Scn2bQ56A07 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.93■□□□□ 0.62
Scn2bQ56A07 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn2bQ56A07 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn2bQ56A07 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
Scn2bQ56A07 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn2bQ56A07 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scn2bQ56A07 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn2bQ56A07 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn2bQ56A07 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn2bQ56A07 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn2bQ56A07 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn2bQ56A07 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Scn2bQ56A07 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.92■□□□□ 0.62
Scn2bQ56A07 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.92■□□□□ 0.62
Scn2bQ56A07 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn2bQ56A07 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn2bQ56A07 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.92■□□□□ 0.62
Scn2bQ56A07 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn2bQ56A07 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn2bQ56A07 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn2bQ56A07 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn2bQ56A07 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Scn2bQ56A07 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn2bQ56A07 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn2bQ56A07 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn2bQ56A07 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn2bQ56A07 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.91■□□□□ 0.62
Scn2bQ56A07 Gm27454-201ENSMUST00000185090 204 ntBASIC18.91■□□□□ 0.62
Scn2bQ56A07 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.91■□□□□ 0.62
Scn2bQ56A07 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Scn2bQ56A07 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Scn2bQ56A07 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn2bQ56A07 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn2bQ56A07 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn2bQ56A07 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Scn2bQ56A07 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Scn2bQ56A07 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn2bQ56A07 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn2bQ56A07 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Scn2bQ56A07 Gm43137-201ENSMUST00000198052 594 ntBASIC18.9■□□□□ 0.62
Scn2bQ56A07 Serp2-204ENSMUST00000228055 705 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms